RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 LRRTM1Q86UE6 522 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 GCSAMQ8N6F7 178 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 NKAIN3Q8N8D7 197 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 CHCHD6Q9BRQ6 235 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 EXOSC4Q9NPD3 245 aaKnown RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 SNTG1Q9NSN8 517 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 CR1P17927 2039 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 VWC2LB2RUY7 222 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 SYNGR1O43759 233 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 RHBDL1O75783 438 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 ADRA2CP18825 462 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 ZNF93P35789 620 aaPredicted RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 ZP1P60852 638 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 PDZK1IP1Q13113 114 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 PEG10Q86TG7 708 aaKnown RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 SATL1Q86VE3 508 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 MKXQ8IYA7 352 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 LRRC29Q8WV35 223 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 TIMD4Q96H15 378 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 GPER1Q99527 375 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 FUNDC2Q9BWH2 189 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 NPTNQ9Y639 398 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 PPIHO43447 177 aaKnown RBP14.23□□□□□ -0.13
SF3B2-211ENST00000531041 AIREO43918 545 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 NOS1APO75052 506 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-211ENST00000531041 PGA5P0DJD9 388 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 CD37P11049 281 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 GPR6P46095 362 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-211ENST00000531041 SLC25A26Q70HW3 274 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 GPR141Q7Z602 305 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 LYPD6Q86Y78 171 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 SAXO1Q8IYX7 474 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 ZSCAN4Q8NAM6 433 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-211ENST00000531041 RAB1CQ92928 201 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 PIMREGQ9BSJ6 248 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 METTL17Q9H7H0 456 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-211ENST00000531041 ITGB1BP2Q9UKP3 347 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 WIPI2Q9Y4P8 454 aa14.23□□□□□ -0.13
SF3B2-211ENST00000531041 IGHV4-30-2A0A087WSY4 118 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 LOC100506127A0A0U1RQW1 187 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 AKR7A2O43488 359 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 CYB5AP00167 134 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 PLATP00750 562 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 SLC25A16P16260 332 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 MYL9P24844 172 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 POU3F4P49335 361 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 PNLDC1Q8NA58 520 aaKnown RBP14.22□□□□□ -0.13
SF3B2-211ENST00000531041 POC1AQ8NBT0 407 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 OR5D18Q8NGL1 313 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 OR51F2Q8NH61 342 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 FOXRED1Q96CU9 486 aaPredicted RBP14.22□□□□□ -0.13
SF3B2-211ENST00000531041 KCTD7Q96MP8 289 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 UQCC2Q9BRT2 126 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 CENPOQ9BU64 300 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 BPESC1Q9GZL8 116 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 MTCH1Q9NZJ7 389 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 TEX15Q9BXT5 2789 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 VPS13CQ709C8 3753 aa14.22□□□□□ -0.13
SF3B2-211ENST00000531041 PPIAL4EA0A075B759 164 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 SHISA3A0PJX4 238 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PPIAL4DF5H284 164 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.21□□□□□ -0.13
SF3B2-211ENST00000531041 SPRY1O43609 319 aaPredicted RBP14.21□□□□□ -0.13
SF3B2-211ENST00000531041 IGHV2-70P01814 119 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PPIAL4FP0DN26 164 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 EGR1P18146 543 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PTGFRP43088 359 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 NR4A2P43354 598 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PSMD7P51665 324 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 ERVK11-1P61568 191 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 BTG1P62324 171 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 FAM201AQ5SY85 155 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 GLT8D1Q68CQ7 371 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 ANKRD13BQ86YJ7 626 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 JAGN1Q8N5M9 183 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PXT1Q8NFP0 134 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 Q96MF0 132 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 NRIP2Q9BQI9 281 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 RASL12Q9NYN1 266 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 PPIAL4AQ9Y536 164 aa14.21□□□□□ -0.13
SF3B2-211ENST00000531041 ITPR3Q14573 2671 aa14.21□□□□□ -0.14
SF3B2-211ENST00000531041 PDCD5O14737 125 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 ANGPTL7O43827 346 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 TMEM225BP0DP42 221 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 GLRA1P23415 457 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 MDH2P40926 338 aaKnown RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 MTNR1BP49286 362 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 HOXA4Q00056 320 aaPredicted RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 ZMYND11Q15326 602 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 C1orf100Q5SVJ3 147 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 ASCL4Q6XD76 172 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 TPRA1Q86W33 373 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 LRRC28Q86X40 367 aaPredicted RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 Q8IYB0 196 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 BOLLQ8N9W6 283 aaKnown RBP14.2□□□□□ -0.14
SF3B2-211ENST00000531041 WFDC11Q8NEX6 87 aa14.2□□□□□ -0.14
SF3B2-211ENST00000531041 TNFAIP8L1Q8WVP5 186 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms