RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RAB14P61106 215 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SEC61A1P61619 476 aaKnown RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 PLGLB1Q02325 96 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 MALLQ13021 153 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 DHRS2Q13268 280 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ARFRP1Q13795 201 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF345Q14585 488 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SLC10A1Q14973 349 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 GRK1Q15835 563 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 MOGAT2Q3SYC2 334 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 PLEKHN1Q494U1 663 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 SLC22A6Q4U2R8 563 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 Q5BKY6 102 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 CLLU1Q5K131 121 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SPINK14Q6IE38 97 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF774Q6NX45 483 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 FAAP20Q6NZ36 180 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 DHRS13Q6UX07 377 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 HOGA1Q86XE5 327 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 MCEMP1Q8IX19 187 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 MUC20Q8N307 709 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 LRRC18Q8N456 261 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SUMF1Q8NBK3 374 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 TMEM104Q8NE00 496 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF680Q8NEM1 530 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 CSNK2A3Q8NEV1 391 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 TMEM185AQ8NFB2 350 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 Q8NFD4 153 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR8H1Q8NGG4 311 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR4D10Q8NGI6 311 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR51T1Q8NGJ9 327 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR5M8Q8NGP6 311 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR13C8Q8NGS7 320 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR5H2Q8NGV7 314 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR8S1Q8NH09 359 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR4K15Q8NH41 348 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ST8SIA4Q92187 359 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 APOBEC3DQ96AK3 386 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 APH1AQ96BI3 265 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SGK3Q96BR1 496 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 BORCS8Q96FH0 119 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ALKBH3Q96Q83 286 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 PRRX2Q99811 253 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SLC6A7Q99884 636 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 VRK1Q99986 396 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 TINAGL1Q9GZM7 467 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 WNT5BQ9H1J7 359 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 KCNK15Q9H427 330 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 RHOFQ9HBH0 211 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 COMMD9Q9P000 198 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 UBQLN2Q9UHD9 624 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 KCNK7Q9Y2U2 307 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 NOP16Q9Y3C1 178 aaKnown RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 NCOR1O75376 2440 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 A0A0D9SG52 128 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PINLYPA6NC86 204 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 RFPL4AA6NLU0 287 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 MCRIP1C9JLW8 97 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 RFPL4AL1F8VTS6 287 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 G3V3Q6 166 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 M0QYG6 137 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 GOSR2O14653 212 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 SSX5O60225 188 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 NOS1APO75052 506 aaPredicted RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 RP2O75695 350 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 OR2F2O95006 317 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 HLA-AP01891 365 aaKnown RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 LIPCP11150 499 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 SLC25A4P12235 298 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 B4GALT1P15291 398 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PPP3CBP16298 524 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 GNB3P16520 340 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 AMY2BP19961 511 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TUBG1P23258 451 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 ZBTB25P24278 435 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 FPR2P25090 351 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 CD34P28906 385 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 BLVRBP30043 206 aaPredicted RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 CALCRP30988 508 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 S100A11P31949 105 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 HRH1P35367 487 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 EIF2S3P41091 472 aaKnown RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 HTR2BP41595 481 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 MEOX1P50221 254 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 MTCP1P56278 107 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TMEM50BP56557 158 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 IL13RA1P78552 427 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PSG4Q00888 419 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PLP2Q04941 152 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 OR2F1Q13607 317 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 RSU1Q15404 277 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 UBE2V2Q15819 145 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 SRSF7Q16629 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
PCF11-205ENST00000530906 LGALSLQ3ZCW2 172 aaPredicted RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 SCGB2B2Q4G0G5 96 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms