RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF133	P52736	654 aa	Predicted RBP	12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	NAAA	Q02083	359 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	TAF13	Q15543	124 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	HFE	Q30201	348 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	GLYATL3	Q5SZD4	288 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	RAB12	Q6IQ22	244 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	SVBP	Q8N300	66 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	NKAIN3	Q8N8D7	197 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	THAP6	Q8TBB0	222 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	PPP1R1C	Q8WVI7	109 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	FOXRED1	Q96CU9	486 aa	Predicted RBP	12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ULBP2	Q9BZM5	246 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	MRPL22	Q9NWU5	206 aa	Known RBP	12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	TINAG	Q9UJW2	476 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	C9orf170	A2RU37	121 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540		H3BSH0	61 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNHIT1	O43257	154 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ISG15	P05161	165 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	GLI4	P10075	376 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	CTSS	P25774	331 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	BDKRB2	P30411	391 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	OR3A2	P47893	321 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNF84	P51523	738 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ATP1B3	P54709	279 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	PNLIPRP3	Q17RR3	467 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNF260	Q3ZCT1	412 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	C10orf128	Q5T292	105 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	CNEP1R1	Q8N9A8	125 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	OR1S2	Q8NGQ3	325 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	PHB2	Q99623	299 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	TMEM100	Q9NV29	134 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	RAB22A	Q9UL26	194 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	PCDHB10	Q9UN67	800 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540		R4GMQ9	66 aa		12.7	□□□□□ -0.38
NR1H3-231	ENST00000529540	TRBV6-7	A0A0A0MS04	114 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNF587B	E7ETH6	402 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540		H7C2Y5	167 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	SLC16A7	O60669	478 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	QDPR	P09417	244 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	SPARC	P09486	303 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	HOXB1	P14653	301 aa	Predicted RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	TBP	P20226	339 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	PRKX	P51817	358 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	MICB	Q29980	383 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	NRN1L	Q496H8	165 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	RNASE10	Q5GAN6	216 aa	Known RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	CARD17	Q5XLA6	110 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	SEM1	Q6ZVN7	128 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	GCNT2	Q8N0V5	402 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	OR52N5	Q8NH56	324 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	RND1	Q92730	232 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	TSNAX	Q99598	290 aa	Known RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	HHLA2	Q9UM44	414 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	PROCR	Q9UNN8	238 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	MEMO1	Q9Y316	297 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	LRP12	Q9Y561	859 aa		12.69	□□□□□ -0.38
NR1H3-231	ENST00000529540	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540		F5H0A9	414 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	RPL36A-HNRNPH2	H7BZ11	118 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	CCS	O14618	274 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SIGLEC5	O15389	551 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SCGN	O76038	276 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	HLA-DQA2	P01906	255 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	CD79A	P11912	226 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	KIR2DL2	P43627	348 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	TLE1	Q04724	770 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SCRN3	Q0VDG4	424 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	PPP1R1A	Q13522	171 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	EIF2B1	Q14232	305 aa	Known RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	MOGAT2	Q3SYC2	334 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SCGB2B2	Q4G0G5	96 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	FBXW9	Q5XUX1	488 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	CORO6	Q6QEF8	472 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	PLXDC2	Q6UX71	529 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	PUSL1	Q8N0Z8	303 aa	Known RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SLC30A7	Q8NEW0	376 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	MRGPRF	Q96AM1	343 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	ZNF775	Q96BV0	537 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	PIK3IP1	Q96FE7	263 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	ABHD6	Q9BV23	337 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	CST11	Q9H112	138 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	SAV1	Q9H4B6	383 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	PLSCR4	Q9NRQ2	329 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	GDF2	Q9UK05	429 aa	Predicted RBP	12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	OSGIN2	Q9Y236	505 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	GTF3C1	Q12789	2109 aa		12.68	□□□□□ -0.38
NR1H3-231	ENST00000529540	METTL21EP	A6NDL7	271 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	DBX1	A6NMT0	343 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	OR2AT4	A6NND4	320 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	DHH	O43323	396 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	TPT1	P13693	172 aa	Known RBP	12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	CTLA4	P16410	223 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	GSK3A	P49840	483 aa		12.67	□□□□□ -0.38
NR1H3-231	ENST00000529540	TAS2R31	P59538	309 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms