RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 BPGMP07738 259 aa2.56□□□□□ -2
CD44-229ENST00000528672 HIST1H1EP10412 219 aaKnown RBP2.56□□□□□ -2
CD44-229ENST00000528672 MYL2P10916 166 aa2.56□□□□□ -2
CD44-229ENST00000528672 CD37P11049 281 aa2.56□□□□□ -2
CD44-229ENST00000528672 GPX2P18283 190 aa2.56□□□□□ -2
CD44-229ENST00000528672 DDTP30046 118 aa2.56□□□□□ -2
CD44-229ENST00000528672 PRDX3P30048 256 aaKnown RBP2.56□□□□□ -2
CD44-229ENST00000528672 HTR1FP30939 366 aa2.56□□□□□ -2
CD44-229ENST00000528672 RFC3P40938 356 aa2.56□□□□□ -2
CD44-229ENST00000528672 NBL1P41271 181 aa2.56□□□□□ -2
CD44-229ENST00000528672 EVX1P49640 407 aa2.56□□□□□ -2
CD44-229ENST00000528672 CLDN12P56749 244 aa2.56□□□□□ -2
CD44-229ENST00000528672 PKIAP61925 76 aa2.56□□□□□ -2
CD44-229ENST00000528672 RPS15AP62244 130 aaKnown RBP2.56□□□□□ -2
CD44-229ENST00000528672 PAX2Q02962 417 aa2.56□□□□□ -2
CD44-229ENST00000528672 BTN1A1Q13410 526 aa2.56□□□□□ -2
CD44-229ENST00000528672 GNMTQ14749 295 aa2.56□□□□□ -2
CD44-229ENST00000528672 MAD2L1BPQ15013 274 aaPredicted RBP2.56□□□□□ -2
CD44-229ENST00000528672 NSDHLQ15738 373 aa2.56□□□□□ -2
CD44-229ENST00000528672 PSMD5Q16401 504 aa2.56□□□□□ -2
CD44-229ENST00000528672 GABRA6Q16445 453 aa2.56□□□□□ -2
CD44-229ENST00000528672 RPEL1Q2QD12 228 aa2.56□□□□□ -2
CD44-229ENST00000528672 PLPPR5Q32ZL2 321 aa2.56□□□□□ -2
CD44-229ENST00000528672 CDNFQ49AH0 187 aa2.56□□□□□ -2
CD44-229ENST00000528672 OGFRL1Q5TC84 451 aaPredicted RBP2.56□□□□□ -2
CD44-229ENST00000528672 FAAP20Q6NZ36 180 aa2.56□□□□□ -2
CD44-229ENST00000528672 PLET1Q6UQ28 207 aa2.56□□□□□ -2
CD44-229ENST00000528672 TMEM205Q6UW68 189 aa2.56□□□□□ -2
CD44-229ENST00000528672 DNM1P46Q6ZS02 220 aa2.56□□□□□ -2
CD44-229ENST00000528672 OLIG3Q7RTU3 272 aa2.56□□□□□ -2
CD44-229ENST00000528672 ASCL5Q7RTU5 278 aa2.56□□□□□ -2
CD44-229ENST00000528672 CTAGE3PQ8IX95 158 aa2.56□□□□□ -2
CD44-229ENST00000528672 CADM2Q8N3J6 435 aa2.56□□□□□ -2
CD44-229ENST00000528672 SMIM20Q8N5G0 67 aa2.56□□□□□ -2
CD44-229ENST00000528672 JAGN1Q8N5M9 183 aa2.56□□□□□ -2
CD44-229ENST00000528672 ST6GALNAC3Q8NDV1 305 aa2.56□□□□□ -2
CD44-229ENST00000528672 MDS2Q8NDY4 140 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR2A12Q8NGT7 310 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR1P1Q8NH06 330 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR10A6Q8NH74 314 aa2.56□□□□□ -2
CD44-229ENST00000528672 LYPD6BQ8NI32 183 aa2.56□□□□□ -2
CD44-229ENST00000528672 ITFG1Q8TB96 612 aa2.56□□□□□ -2
CD44-229ENST00000528672 PLPPR1Q8TBJ4 325 aa2.56□□□□□ -2
CD44-229ENST00000528672 ZPLD1Q8TCW7 415 aa2.56□□□□□ -2
CD44-229ENST00000528672 GNPDA2Q8TDQ7 276 aa2.56□□□□□ -2
CD44-229ENST00000528672 CASTOR1Q8WTX7 329 aa2.56□□□□□ -2
CD44-229ENST00000528672 DNAJC9Q8WXX5 260 aa2.56□□□□□ -2
CD44-229ENST00000528672 APH1AQ96BI3 265 aa2.56□□□□□ -2
CD44-229ENST00000528672 ZHX1-C8orf76Q96EF9 292 aa2.56□□□□□ -2
CD44-229ENST00000528672 CMTM7Q96FZ5 175 aa2.56□□□□□ -2
CD44-229ENST00000528672 MAGEB18Q96M61 343 aa2.56□□□□□ -2
CD44-229ENST00000528672 OXGR1Q96P68 337 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR8B4Q96RC9 309 aa2.56□□□□□ -2
CD44-229ENST00000528672 ZNF382Q96SR6 550 aa2.56□□□□□ -2
CD44-229ENST00000528672 KLF6Q99612 283 aaPredicted RBP2.56□□□□□ -2
CD44-229ENST00000528672 PDCD10Q9BUL8 212 aa2.56□□□□□ -2
CD44-229ENST00000528672 MS4A8Q9BY19 250 aa2.56□□□□□ -2
CD44-229ENST00000528672 UGT2B28Q9BY64 529 aa2.56□□□□□ -2
CD44-229ENST00000528672 MROQ9BYG7 248 aa2.56□□□□□ -2
CD44-229ENST00000528672 CHST5Q9GZS9 411 aa2.56□□□□□ -2
CD44-229ENST00000528672 NXF2Q9GZY0 626 aaKnown RBP2.56□□□□□ -2
CD44-229ENST00000528672 BEX1Q9HBH7 125 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR1A1Q9P1Q5 309 aa2.56□□□□□ -2
CD44-229ENST00000528672 CD84Q9UIB8 345 aa2.56□□□□□ -2
CD44-229ENST00000528672 SLC35A3Q9Y2D2 325 aa2.56□□□□□ -2
CD44-229ENST00000528672 MOB4Q9Y3A3 225 aa2.56□□□□□ -2
CD44-229ENST00000528672 HSPB11Q9Y547 144 aa2.56□□□□□ -2
CD44-229ENST00000528672 HSPE1-MOB4S4R3N1 261 aa2.56□□□□□ -2
CD44-229ENST00000528672 USP47Q96K76 1375 aa2.56□□□□□ -2
CD44-229ENST00000528672 C9orf84Q5VXU9 1444 aa2.56□□□□□ -2
CD44-229ENST00000528672 A2MP01023 1474 aa2.56□□□□□ -2
CD44-229ENST00000528672 PCF11O94913 1555 aaKnown RBP2.56□□□□□ -2
CD44-229ENST00000528672 DNMBPQ6XZF7 1577 aa2.56□□□□□ -2
CD44-229ENST00000528672 BICRAQ9NZM4 1560 aa2.56□□□□□ -2
CD44-229ENST00000528672 A0A1W2PRF3 423 aa2.55□□□□□ -2
CD44-229ENST00000528672 A0A1W2PRM7 423 aa2.55□□□□□ -2
CD44-229ENST00000528672 TVP23AA6NH52 213 aa2.55□□□□□ -2
CD44-229ENST00000528672 KRTAP16-1A8MUX0 517 aa2.55□□□□□ -2
CD44-229ENST00000528672 TDRD15B5MCY1 1934 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 FTCDNL1E5RQL4 147 aa2.55□□□□□ -2
CD44-229ENST00000528672 PPP5D1E7EU14 171 aa2.55□□□□□ -2
CD44-229ENST00000528672 GFYI3L273 518 aa2.55□□□□□ -2
CD44-229ENST00000528672 GPR31O00270 319 aa2.55□□□□□ -2
CD44-229ENST00000528672 RAD51CO43502 376 aa2.55□□□□□ -2
CD44-229ENST00000528672 AQRO60306 1485 aaKnown RBP eCLIP2.55□□□□□ -2
CD44-229ENST00000528672 MPZL2O60487 215 aa2.55□□□□□ -2
CD44-229ENST00000528672 GGCTO75223 188 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 CA11O75493 328 aa2.55□□□□□ -2
CD44-229ENST00000528672 S1PR2O95136 353 aa2.55□□□□□ -2
CD44-229ENST00000528672 SLC25A27O95847 323 aa2.55□□□□□ -2
CD44-229ENST00000528672 HLA-AP01891 365 aaKnown RBP2.55□□□□□ -2
CD44-229ENST00000528672 CTSLP07711 333 aa2.55□□□□□ -2
CD44-229ENST00000528672 RHOCP08134 193 aa2.55□□□□□ -2
CD44-229ENST00000528672 TSPAN19P0C672 248 aa2.55□□□□□ -2
CD44-229ENST00000528672 LIPCP11150 499 aa2.55□□□□□ -2
CD44-229ENST00000528672 PGAM2P15259 253 aa2.55□□□□□ -2
CD44-229ENST00000528672 UGT2B7P16662 529 aa2.55□□□□□ -2
CD44-229ENST00000528672 ZNF17P17021 662 aa2.55□□□□□ -2
CD44-229ENST00000528672 CELP19835 753 aa2.55□□□□□ -2
CD44-229ENST00000528672 VDAC1P21796 283 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms