RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SLC1A7O00341 560 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 PGA5P0DJD9 388 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 ATP6V1B1P15313 513 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 FAHP16930 419 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 PLCXD3Q63HM9 321 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 ZNF782Q6ZMW2 699 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-202ENST00000527827 SGCDQ92629 289 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 ITFG2Q969R8 447 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 PHF21AQ96BD5 680 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 R3HDM4Q96D70 268 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 CITED2Q99967 270 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-202ENST00000527827 CDCA4Q9BXL8 241 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 GPR84Q9NQS5 396 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 LAMP5Q9UJQ1 280 aa19.03■□□□□ 0.64
CPSF1-202ENST00000527827 DSCAML1Q8TD84 2053 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 NBEAL2Q6ZNJ1 2754 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 TMEM269A0A1B0GVZ9 245 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 hCG_1809904A0A1W2PP81 198 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 A0A1W2PPE2 198 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 A0A1W2PR64 198 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 A0A1W2PRV1 198 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 A6NDX4 124 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 PSMD9O00233 223 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 SYNGR1O43759 233 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 SLC2A5P22732 501 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 DLX6P56179 175 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 MS4A2Q01362 244 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 RIPPLY1Q0D2K3 151 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 FAM98BQ52LJ0 330 aaKnown RBP19.02■□□□□ 0.64
CPSF1-202ENST00000527827 SLC35D3Q5M8T2 416 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 LDLRAD2Q5SZI1 272 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 ZBTB37Q5TC79 503 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 DHFR2Q86XF0 187 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 OR4F17Q8NGA8 305 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 OR51E1Q8TCB6 317 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 OR4F4Q96R69 305 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 TEAD3Q99594 435 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 WNT10AQ9GZT5 417 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 PBOV1Q9GZY1 135 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 PIGLQ9Y2B2 252 aa19.02■□□□□ 0.64
CPSF1-202ENST00000527827 ARRDC5A6NEK1 342 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 PRR32B1ATL7 298 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 NOS1APO75052 506 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-202ENST00000527827 GK3PQ14409 553 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 CNN3Q15417 329 aaKnown RBP19.01■□□□□ 0.63
CPSF1-202ENST00000527827 DEGS2Q6QHC5 323 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 TMEM179BQ7Z7N9 219 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 COMMD2Q86X83 199 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 TMEM219Q86XT9 240 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 CALHM1Q8IU99 346 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 C1orf21Q9H246 121 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 MUC13Q9H3R2 512 aa19.01■□□□□ 0.63
CPSF1-202ENST00000527827 C17orf98A8MV24 154 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 ODF3BA8MYP8 253 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 J3QT63 122 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 GSC2O15499 205 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 NRASP01111 189 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 TK1P04183 234 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 HAAOP46952 286 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 CDK5Q00535 292 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 TRIM25Q14258 630 aaKnown RBP19■□□□□ 0.63
CPSF1-202ENST00000527827 Q6ZS46 218 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 OR8B4Q96RC9 309 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 NRIP2Q9BQI9 281 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 YIPF3Q9GZM5 350 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 ENPP5Q9UJA9 477 aa19■□□□□ 0.63
CPSF1-202ENST00000527827 TBL2Q9Y4P3 447 aaKnown RBP19■□□□□ 0.63
CPSF1-202ENST00000527827 HMGN1P05114 100 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 PIPP12273 146 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-202ENST00000527827 RPS7P62081 194 aaKnown RBP18.99■□□□□ 0.63
CPSF1-202ENST00000527827 ZNF684Q5T5D7 378 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 KCTD18Q6PI47 426 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-202ENST00000527827 BATF2Q8N1L9 274 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 RPS4Y2Q8TD47 263 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 FOXRED1Q96CU9 486 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-202ENST00000527827 MALSU1Q96EH3 234 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 PRSS22Q9GZN4 317 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 HES4Q9HCC6 221 aa18.99■□□□□ 0.63
CPSF1-202ENST00000527827 PQLC2LA1A4F0 135 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 NXPH2O95156 264 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 CST1P01037 141 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 ARG1P05089 322 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 RAP2AP10114 183 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 ROM1Q03395 351 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 MFGE8Q08431 387 aaPredicted RBP18.98■□□□□ 0.63
CPSF1-202ENST00000527827 SSX2Q16385 188 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 FOXB2Q5VYV0 432 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 TMEM42Q69YG0 159 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 ZNF573Q86YE8 665 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 OR5M11Q96RB7 305 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 MROQ9BYG7 248 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 ABCB10Q9NRK6 738 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 OR14J1Q9UGF5 321 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 NUFIP1Q9UHK0 495 aaKnown RBP18.98■□□□□ 0.63
CPSF1-202ENST00000527827 ARL2BPQ9Y2Y0 163 aa18.98■□□□□ 0.63
CPSF1-202ENST00000527827 DHRS3O75911 302 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 OSMP13725 252 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 BLCAPP62952 87 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 APOFQ13790 326 aa18.97■□□□□ 0.63
CPSF1-202ENST00000527827 ZNF626Q68DY1 528 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms