RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SP1P08047 785 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PGA3P0DJD8 388 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 ICAM2P13598 275 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TCL1AP56279 114 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 CACNG7P62955 275 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 HOXA4Q00056 320 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 SLC38A11Q08AI6 406 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 NPY5RQ15761 445 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 UBE2V2Q15819 145 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PAQR6Q6TCH4 344 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 WDFY1Q8IWB7 410 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TEX29Q8N6K0 151 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 OR5M1Q8NGP8 315 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 UTP23Q9BRU9 249 aaKnown RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 MYH1P12882 1939 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 A0A0D9SEW6 157 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 CDC14CA4D256 554 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 WNT7AO00755 349 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 SLCO2B1O94956 709 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PRSS2P07478 247 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 CPMP14384 443 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 NBL1P41271 181 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PNLIPRP2P54317 469 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 CLDN18P56856 261 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 DLK1P80370 383 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PRDX4Q13162 271 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 GPNMBQ14956 572 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 EXOSC7Q15024 291 aaKnown RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 RBPMS2Q6ZRY4 209 aaKnown RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF511Q8NB15 262 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 OR14A16Q8NHC5 309 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF480Q8WV37 535 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 C11orf40Q8WZ69 217 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM38BQ9NVV0 291 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 A0A0J9YY10 115 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TRBV11-1A0A0K0K1C0 115 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 LOC107986453A0A1B0GWG9 222 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 SNURFLB1AK76 121 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 CRYBA1P05813 215 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 LIPFP07098 398 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PGA4P0DJD7 388 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PGA5P0DJD9 388 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TEAD1P28347 426 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 OPRM1P35372 400 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 EVX1P49640 407 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PABPC1L2AQ5JQF8 200 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 FHL5Q5TD97 284 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 MRPL54Q6P161 138 aaKnown RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 FUNDC1Q8IVP5 155 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 UMODL1-AS1Q8N2C9 162 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 C17orf78Q8N4C9 275 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 OR5M9Q8NGP3 310 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 GABRG3Q99928 467 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 SLC17A9Q9BYT1 436 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 PTRH2Q9Y3E5 179 aaKnown RBP6.52□□□□□ -1.37
CTNND1-216ENST00000527467 A0A0A6YYC8 382 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 I3L1I5 382 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 POLR2IP36954 125 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 MFAP4P55083 255 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 KIR2DS3Q14952 304 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 FAM74A3Q4VXF1 159 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 FNDC7Q5VTL7 733 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 RLN3Q8WXF3 142 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TWSG1Q9GZX9 223 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 OR51M1Q9H341 326 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 FOXJ2Q9P0K8 574 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 MMACHCQ9Y4U1 282 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 IDSB3KWA1 339 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 SIRPB1O00241 398 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 GPR75O95800 540 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 HBZP02008 142 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 RPS4Y1P22090 263 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 COL8A1P27658 744 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 PCSK6P29122 969 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 CDX1P47902 265 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 PRLHRP49683 370 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 CKS1BP61024 79 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 GNB2P62879 340 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 OR10G4Q8NGN3 311 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 OR10G9Q8NGN4 311 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 OR10G7Q8NGN6 311 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 RPS4Y2Q8TD47 263 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ABHD3Q8WU67 409 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 NUDCD2Q8WVJ2 157 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM40Q8WWA1 233 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 RDH5Q92781 318 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ISOC2Q96AB3 205 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 KTI12Q96EK9 354 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 CLEC2DQ9UHP7 191 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TMED3Q9Y3Q3 217 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 SERINC4A6NH21 518 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms