RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 LHFPL1Q86WI0 220 aa10.99□□□□□ -0.65
CAPN1-208ENST00000527323 PGAM5Q96HS1 289 aa10.99□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF2Q9BSG1 426 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-208ENST00000527323 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
CAPN1-208ENST00000527323 KLRF1Q9NZS2 232 aa10.99□□□□□ -0.65
CAPN1-208ENST00000527323 CACFD1Q9UGQ2 172 aa10.99□□□□□ -0.65
CAPN1-208ENST00000527323 LY6G6EA0A0G2JKS1 128 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 A0A1B0GV50 99 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 IGHG1P01857 330 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 PRH1P02810 166 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 GLB1P16278 677 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 PTGER4P35408 488 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ACY1Q03154 408 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 KISS1Q15726 138 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF561Q8N587 486 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 RHBDD1Q8TEB9 315 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 LIN37Q96GY3 246 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-208ENST00000527323 PRRX2Q99811 253 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 MOB1AQ9H8S9 216 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 SPACA1Q9HBV2 294 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ZMAT5Q9UDW3 170 aaKnown RBP10.98□□□□□ -0.65
CAPN1-208ENST00000527323 U3KQA8 63 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 SVILO95425 2214 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 TXNL1O43396 289 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF44P15621 663 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF41P51814 821 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-208ENST00000527323 FABP9Q0Z7S8 132 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ECH1Q13011 328 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 MYBPHQ13203 477 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 DOK3Q7L591 496 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 MVB12AQ96EY5 273 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ALKBH4Q9NXW9 302 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ANAPC10Q9UM13 185 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ZZEF1O43149 2961 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 A0A1W2PNR3 127 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 C7orf77A4D0Y5 90 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 A6NLC8 198 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 S100A8P05109 93 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 RPS2P15880 293 aaKnown RBP10.98□□□□□ -0.65
CAPN1-208ENST00000527323 ANOS1P23352 680 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 GABRR1P24046 479 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 IL15RAQ13261 267 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 MIDNQ504T8 468 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 AWAT1Q58HT5 328 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 OPN5Q6U736 354 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 SEMA6DQ8NFY4 1073 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 OR6S1Q8NH40 331 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 IFI44Q8TCB0 444 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 CD300LFQ8TDQ1 290 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 IP6K3Q96PC2 410 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 RSRP1Q9BUV0 290 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 PECRQ9BY49 303 aa10.98□□□□□ -0.65
CAPN1-208ENST00000527323 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 IGKV1-9A0A0C4DH69 117 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 F5H5K5 113 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 DUX1O43812 170 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 MT-ND4LP03901 98 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 HPNP05981 417 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 FCGR2AP12318 317 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 CAMLGP49069 296 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 GGNBP1Q5YKI7 109 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 ADAM5Q6NVV9 412 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 WDR5BQ86VZ2 330 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF441Q8N8Z8 693 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 MRPL24Q96A35 216 aaKnown RBP10.97□□□□□ -0.65
CAPN1-208ENST00000527323 OR5B2Q96R09 309 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 PLEKHJ1Q9NW61 149 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 PPP4R1LQ9P1A2 415 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 POMT1Q9Y6A1 747 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 CHD8Q9HCK8 2581 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 ACACAQ13085 2346 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 QDPRP09417 244 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 GLI4P10075 376 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 FOLR2P14207 255 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF17P17021 662 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 GUCA1AP43080 201 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-208ENST00000527323 HMGN3Q15651 99 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 SP6Q3SY56 376 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 C6orf201Q7Z4U5 140 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 TOMM40LQ969M1 308 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 TIMM10BQ9Y5J6 103 aa10.97□□□□□ -0.65
CAPN1-208ENST00000527323 A0A1W2PPE3 182 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 C5orf52A6NGY3 159 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 SMIM6P0DI80 62 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 GUK1Q16774 197 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 MRPL13Q9BYD1 178 aaKnown RBP10.96□□□□□ -0.65
CAPN1-208ENST00000527323 RAB33BQ9H082 229 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.96□□□□□ -0.65
CAPN1-208ENST00000527323 B3GAT1Q9P2W7 334 aa10.96□□□□□ -0.65
CAPN1-208ENST00000527323 PHF3Q92576 2039 aaKnown RBP10.96□□□□□ -0.66
CAPN1-208ENST00000527323 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.66
CAPN1-208ENST00000527323 hCG_1809904A0A1W2PP81 198 aa10.96□□□□□ -0.66
CAPN1-208ENST00000527323 A0A1W2PR64 198 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms