RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 EXOGQ9Y2C4 368 aaKnown RBP17.03■□□□□ 0.32
VPS28-206ENST00000526734 SFTPBP07988 381 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 RPSAP08865 295 aaKnown RBP17.02■□□□□ 0.32
VPS28-206ENST00000526734 PGA5P0DJD9 388 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 PSG2P11465 335 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 GABRB1P18505 474 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 ARF6P62330 175 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 TP53I3Q53FA7 332 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 METAP1DQ6UB28 335 aaPredicted RBP17.02■□□□□ 0.32
VPS28-206ENST00000526734 SDSLQ96GA7 329 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 CHST5Q9GZS9 411 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 C8orf4Q9NR00 106 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 INPP5EQ9NRR6 644 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 ZNF222Q9UK12 451 aa17.02■□□□□ 0.32
VPS28-206ENST00000526734 IGKV1D-17A0A075B6S4 117 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 TRBV23-1A0A0A0MS06 115 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 IGHV1-69DA0A0B4J2H0 117 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 CENPVL3A0A0U1RRI6 287 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 LOC107986453A0A1B0GWG9 222 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 HAX1O00165 279 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 FADS2O95864 444 aaKnown RBP17.01■□□□□ 0.31
VPS28-206ENST00000526734 IGHV1-69P01742 117 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 GABRA2P47869 451 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 CCR9P51686 369 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 ELF3P78545 371 aaPredicted RBP17.01■□□□□ 0.31
VPS28-206ENST00000526734 ZNF91Q05481 1191 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 IL24Q13007 206 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 CNN3Q15417 329 aaKnown RBP17.01■□□□□ 0.31
VPS28-206ENST00000526734 DGUOKQ16854 277 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 BRD3OSQ6XYD6 125 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 ACP7Q6ZNF0 438 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 C1orf122Q6ZSJ8 110 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 ENTHD1Q8IYW4 607 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 PRSS35Q8N3Z0 413 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 OR2G2Q8NGZ5 317 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 RHOXF1Q8NHV9 184 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 H1FXQ92522 213 aaKnown RBP17.01■□□□□ 0.31
VPS28-206ENST00000526734 ZDHHC16Q969W1 377 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 SLC29A1Q99808 456 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 NRIP2Q9BQI9 281 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 ONECUT1Q9UBC0 465 aa17.01■□□□□ 0.31
VPS28-206ENST00000526734 LOC100130705A0A1B0GUX0 176 aa17■□□□□ 0.31
VPS28-206ENST00000526734 ISG15P05161 165 aa17■□□□□ 0.31
VPS28-206ENST00000526734 HTR1AP08908 422 aa17■□□□□ 0.31
VPS28-206ENST00000526734 HKR1P10072 659 aa17■□□□□ 0.31
VPS28-206ENST00000526734 DBTP11182 482 aaKnown RBP17■□□□□ 0.31
VPS28-206ENST00000526734 FUT6P51993 359 aa17■□□□□ 0.31
VPS28-206ENST00000526734 GUCA2AQ02747 115 aa17■□□□□ 0.31
VPS28-206ENST00000526734 RAB40BQ12829 278 aa17■□□□□ 0.31
VPS28-206ENST00000526734 FOXL1Q12952 345 aa17■□□□□ 0.31
VPS28-206ENST00000526734 MRPL28Q13084 256 aaKnown RBP17■□□□□ 0.31
VPS28-206ENST00000526734 ODF4Q2M2E3 257 aa17■□□□□ 0.31
VPS28-206ENST00000526734 SYS1Q8N2H4 156 aa17■□□□□ 0.31
VPS28-206ENST00000526734 TMEM86BQ8N661 226 aa17■□□□□ 0.31
VPS28-206ENST00000526734 HAVCR2Q8TDQ0 301 aa17■□□□□ 0.31
VPS28-206ENST00000526734 LGALS12Q96DT0 336 aa17■□□□□ 0.31
VPS28-206ENST00000526734 C1orf147Q96MC9 270 aaPredicted RBP17■□□□□ 0.31
VPS28-206ENST00000526734 FAM118AQ9NWS6 357 aa17■□□□□ 0.31
VPS28-206ENST00000526734 M0R1W7 72 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 SLC1A7O00341 560 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 NXPH2O95156 264 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 BAG2O95816 211 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 SELLP14151 372 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 NDUFB7P17568 137 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 KIR3DL2P43630 455 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 BLMHQ13867 455 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 GALEQ14376 348 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 SLC9A3R2Q15599 337 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 DMRTC1Q5HYR2 192 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 VMO1Q7Z5L0 202 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 FGFRL1Q8N441 504 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 ZNF561Q8N587 486 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 DNAAF1Q8NEP3 725 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 ZNF555Q8NEP9 628 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 TMEM185AQ8NFB2 350 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 NPRL2Q8WTW4 380 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 LHX4Q969G2 390 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 HES4Q9HCC6 221 aa16.99■□□□□ 0.31
VPS28-206ENST00000526734 SMPD3Q9NY59 655 aaPredicted RBP16.99■□□□□ 0.31
VPS28-206ENST00000526734 CAB39Q9Y376 341 aaPredicted RBP16.99■□□□□ 0.31
VPS28-206ENST00000526734 RPL36Q9Y3U8 105 aaKnown RBP16.99■□□□□ 0.31
VPS28-206ENST00000526734 FBN3Q75N90 2809 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 SYNGR1O43759 233 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 IGHA1P01876 353 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 OR12D2P58182 307 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 UTS2BQ765I0 119 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 RNF166Q96A37 237 aaPredicted RBP16.98■□□□□ 0.31
VPS28-206ENST00000526734 BORCS8Q96FH0 119 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 UNKLQ9H9P5 680 aaKnown RBP16.98■□□□□ 0.31
VPS28-206ENST00000526734 MRPS18AQ9NVS2 196 aaKnown RBP16.98■□□□□ 0.31
VPS28-206ENST00000526734 MAB21L2Q9Y586 359 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 POMT1Q9Y6A1 747 aa16.98■□□□□ 0.31
VPS28-206ENST00000526734 A0A1W2PPH5 198 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 FAM230AA0A1W2PPH8 454 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 A0A1W2PQ09 198 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 A6NIN4 97 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 RFPL4AA6NLU0 287 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 RFPL4AL1F8VTS6 287 aa16.97■□□□□ 0.31
VPS28-206ENST00000526734 KNG1P01042 644 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms