RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SSX1Q16384 188 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ZBTB37Q5TC79 503 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 UBE2UQ5VVX9 321 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF773Q6PK81 442 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 OR4F5Q8NH21 305 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 OR5AK2Q8NH90 309 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 HAVCR2Q8TDQ0 301 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 PIGCQ92535 297 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 TAF15Q92804 592 aaKnown RBP eCLIP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 FGGYQ96C11 551 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ELMOD3Q96FG2 381 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF48Q96MX3 618 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 OR2V2Q96R30 315 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 DIRC2Q96SL1 478 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 CCDC90BQ9GZT6 254 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 GCM1Q9NP62 436 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 TRIM36Q9NQ86 728 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 IL19Q9UHD0 177 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 NUP50Q9UKX7 468 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 HHLA2Q9UM44 414 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 NOTCH3Q9UM47 2321 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 EPPK1P58107 5090 aaKnown RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 PPIAL4EA0A075B759 164 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 TRBV5-7A0A0A0MS05 114 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PPIAL4CA0A0B4J2A2 164 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF816-ZNF321PA0A0X1KG74 233 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PNMA8CA0A1B0GUJ8 204 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 A0A1B0GVI7 797 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PLSCR5A0PG75 271 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PPIAL4DF5H284 164 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MYL12BO14950 172 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 CDC14BO60729 498 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PPIAL4FP0DN26 164 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 CPEP16870 476 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 OMGP23515 440 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 EEF1B2P24534 225 aaKnown RBP9.09□□□□□ -0.95
NEDD8-204ENST00000526430 SLC3A1Q07837 685 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MLLT11Q13015 90 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-204ENST00000526430 GPR50Q13585 617 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MED22Q15528 200 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PCGF3Q3KNV8 242 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PRAMEF6Q5VXH4 476 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 OLFML2AQ68BL7 652 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 C16orf87Q6PH81 154 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 TMEM91Q6ZNR0 172 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 CELF2-AS1Q8N7Q2 184 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF676Q8N7Q3 588 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 CCDC54Q8NEL0 328 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MYCBPQ99417 103 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MGLLQ99685 303 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 SLC22A4Q9H015 551 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 TLNRD1Q9H1K6 362 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 GPR173Q9NS66 373 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF69Q9UC07 566 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 MPC1Q9Y5U8 109 aa9.09□□□□□ -0.95
NEDD8-204ENST00000526430 PQLC2LA1A4F0 135 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 ANKRD30BLA7E2S9 258 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 MTRF1O75570 445 aaKnown RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 GPX5O75715 221 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 TSPAN15O95858 294 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 NRASP01111 189 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 LHBP01229 141 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 IGFBP3P17936 291 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 OR8G1Q15617 311 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 TAF9Q16594 264 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 CEACAM21Q3KPI0 293 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 CEP78Q5JTW2 689 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 CLVS2Q5SYC1 327 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 SYT6Q5T7P8 510 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 LIPKQ5VXJ0 399 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF826PQ6ZT77 177 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 MOB3CQ70IA8 216 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 KIR3DL3Q8N743 410 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 OR1M1Q8NGA1 313 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF420Q8TAQ5 688 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 Q8TCH9 128 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 C10orf35Q96D05 121 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 NR1H4Q96RI1 486 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 PAPOLGQ9BWT3 736 aaKnown RBP9.08□□□□□ -0.96
NEDD8-204ENST00000526430 KRTAP17-1Q9BYP8 105 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 CHST5Q9GZS9 411 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 OR51I2Q9H344 312 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
NEDD8-204ENST00000526430 IGHV1-69-2A0A0G2JMI3 117 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 TNFRSF13BO14836 293 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-204ENST00000526430 NDUFA7O95182 113 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 CD37P11049 281 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 JUNBP17275 347 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-204ENST00000526430 ATF1P18846 271 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms