RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ESRRGP62508 458 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PITPNAQ00169 270 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 IRF8Q02556 426 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 GLO1Q04760 184 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 C2orf54Q08AI8 447 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SIGLEC14Q08ET2 396 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 C2orf80Q0P641 193 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNHIT3Q15649 155 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ATP6V1FQ16864 119 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TRMT5Q32P41 509 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ARHGAP11BQ3KRB8 267 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ACTBL2Q562R1 376 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 YIF1BQ5BJH7 314 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CDKL4Q5MAI5 379 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SAPCD1Q5SSQ6 148 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TPRG1LQ5T0D9 272 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 IDNKQ5T6J7 187 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OGFRL1Q5TC84 451 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 HHATQ5VTY9 493 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 HACD4Q5VWC8 232 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TRIQKQ629K1 86 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LPCAT4Q643R3 524 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF470Q6ECI4 717 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TTC33Q6PID6 262 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF773Q6PK81 442 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM220Q6QAJ8 160 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 WDR82Q6UXN9 313 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RASSF6Q6ZTQ3 369 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LINC00173Q6ZV60 143 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 AHSA2Q719I0 299 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PID1Q7Z2X4 250 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SMIM15Q7Z3B0 74 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 DCXRQ7Z4W1 244 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 S100A7AQ86SG5 101 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 AKAP14Q86UN6 197 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB43Q86YS6 212 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC30A8Q8IWU4 369 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RIMKLAQ8IXN7 391 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LRRC34Q8IZ02 419 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LGI3Q8N145 548 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CYP4Z2PQ8N1L4 340 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OSR2Q8N2R0 312 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ATPAF2Q8N5M1 289 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TBC1D19Q8N5T2 526 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PQLC3Q8N755 202 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 C8orf31Q8N9H6 132 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF565Q8N9K5 539 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LRRC75AQ8NAA5 344 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR51D1Q8NGF3 324 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR1J4Q8NGS1 313 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR6N2Q8NGY6 317 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR13G1Q8NGZ3 307 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR8U1Q8NH10 309 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 OR5W2Q8NH69 310 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ITFG1Q8TB96 612 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PIFOQ8TCI5 191 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SFXN5Q8TD22 340 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CYGBQ8WWM9 190 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RTN4IP1Q8WWV3 396 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ANKRD7Q92527 254 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RERGQ96A58 199 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TESCQ96BS2 214 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF707Q96C28 371 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 FLYWCH2Q96CP2 140 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CMTM5Q96DZ9 223 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF681Q96N22 645 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RILPQ96NA2 401 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZFP3Q96NJ6 502 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF317Q96PQ6 595 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CSPG4P5Q96PW8 444 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TSC22D3Q99576 134 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 KLF6Q99612 283 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 DOK1Q99704 481 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CHCHD7Q9BUK0 85 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 CHAC1Q9BUX1 264 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TSGA10Q9BZW7 698 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 DEFB129Q9H1M3 183 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TDRD3Q9H7E2 651 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 UBE2ZQ9H832 354 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TRIM45Q9H8W5 580 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 EDA2RQ9HAV5 297 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM27Q9HBJ8 222 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 LYRM4Q9HD34 91 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 C8orf4Q9NR00 106 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC2A9Q9NRM0 540 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SDHAF3Q9NRP4 125 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 RGS18Q9NS28 235 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF355PQ9NSJ1 428 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 USE1Q9NZ43 259 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 PEF1Q9UBV8 284 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 FBXL3Q9UKT7 428 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ST3GAL6Q9Y274 331 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 POFUT2Q9Y2G5 429 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ARL2BPQ9Y2Y0 163 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 YARS2Q9Y2Z4 477 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 FAM32AQ9Y421 112 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 SNX10Q9Y5X0 201 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 MN1Q10571 1320 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 MAP3K19Q56UN5 1328 aa0.83□□□□□ -2.28
ECHDC1-219ENST00000526299 ADCY9O60503 1353 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms