RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 OR6C70A6NIJ9 312 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 FAM166BA8MTA8 275 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 TP53I11O14683 189 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 UBDO15205 165 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ACOX3O15254 700 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 EMC8O43402 210 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ICOSLGO75144 302 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 UGT2B11O75310 529 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 GLSO94925 669 aaPredicted RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 MFN2O95140 757 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CPSF4O95639 269 aaKnown RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 IGKV1D-16P01601 117 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 C1QCP02747 245 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 P04436 131 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 STSP08842 583 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 DRD5P21918 477 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 GABRR1P24046 479 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 IL12BP29460 328 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 S100A3P33764 101 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 BMI1P35226 326 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 MDH1P40925 334 aaKnown RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 MAP3K8P41279 467 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ACAA2P42765 397 aaKnown RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 CDKN2CP42773 168 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PPICP45877 212 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 RFX3P48380 749 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 TMED10P49755 219 aaKnown RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 HBA1P69905 142 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PSPHP78330 225 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 S100A12P80511 92 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 MRPS11P82912 194 aaKnown RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 FUT5Q11128 374 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 RIPK1Q13546 671 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 RCAN2Q14206 197 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 IGFBP7Q16270 282 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PRR4Q16378 134 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR2B11Q5JQS5 317 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ASPHD2Q6ICH7 369 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ACSM5Q6NUN0 579 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ZNF544Q6NX49 715 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ERICH5Q6P6B1 374 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 GALNT10Q86SR1 603 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 SLC51BQ86UW2 128 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 STX12Q86Y82 276 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 FUNDC1Q8IVP5 155 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 NRMQ8IXM6 262 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CLEC4FQ8N1N0 589 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 NATD1Q8N6N6 113 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 Q8N7P7 452 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CDRT4Q8N9R6 151 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ZFP62Q8NB50 900 aaPredicted RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 ST6GALNAC3Q8NDV1 305 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR2M7Q8NG81 312 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR5D16Q8NGK9 328 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR4A15Q8NGL6 344 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR5AK3PQ8NH89 298 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PAQR8Q8TEZ7 354 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 C10orf82Q8WW14 230 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OR5P2Q8WZ92 322 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CDS1Q92903 461 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 TMBIM1Q969X1 311 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 TMIGD2Q96BF3 282 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 RMND5BQ96G75 393 aaPredicted RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 SLC35G5Q96KT7 338 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 RILPQ96NA2 401 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CCDC115Q96NT0 180 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ZNF317Q96PQ6 595 aaPredicted RBP2.75□□□□□ -1.97
CD44-219ENST00000525685 IL4I1Q96RQ9 567 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 STACQ99469 402 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ZBTB18Q99592 522 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CIB1Q99828 191 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 SLC35A5Q9BS91 424 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 DOHHQ9BU89 302 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 OSBPL11Q9BXB4 747 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PPDPFQ9H3Y8 114 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 ZNF702PQ9H963 129 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 PROK2Q9HC23 129 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 AGPAT4Q9NRZ5 378 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 TAS2R9Q9NYW1 312 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 SLC7A8Q9UHI5 535 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 BTNL2Q9UIR0 455 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 COMMD3-BMI1R4GMX3 469 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 CELSR3Q9NYQ7 3312 aa2.75□□□□□ -1.97
CD44-219ENST00000525685 SEC16AO15027 2179 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 PRRC2AP48634 2157 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 SPENQ96T58 3664 aaKnown RBP2.74□□□□□ -1.97
CD44-219ENST00000525685 PPIAL4CA0A0B4J2A2 164 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 C17orf51A8MQB3 221 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 ZNF879B4DU55 563 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 B4DXG7 233 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 NPIPA7E9PJI5 369 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 H0Y9J4 135 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 H3BMQ9 156 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 KLRC4-KLRK1H3BQV0 150 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 J3QKU1 62 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 CDC40O60508 579 aaKnown RBP eCLIP2.74□□□□□ -1.97
CD44-219ENST00000525685 REM1O75628 298 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 KCNK2O95069 426 aa2.74□□□□□ -1.97
CD44-219ENST00000525685 HMGN1P05114 100 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms