RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RPL22L1Q6P5R6 122 aaKnown RBP10.4□□□□□ -0.74
SMCO4-202ENST00000525141 AHSA2Q719I0 299 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 RDH10Q8IZV5 341 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 FGFRL1Q8N441 504 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 BOLLQ8N9W6 283 aaKnown RBP10.4□□□□□ -0.74
SMCO4-202ENST00000525141 ZNF485Q8NCK3 441 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 OR1M1Q8NGA1 313 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 RPS4Y2Q8TD47 263 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 GCDHQ92947 438 aaPredicted RBP10.4□□□□□ -0.74
SMCO4-202ENST00000525141 MYDGFQ969H8 173 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 SEH1LQ96EE3 360 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 RNF170Q96K19 258 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 DUX5Q96PT3 197 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 NUDT16L1Q9BRJ7 211 aaKnown RBP10.4□□□□□ -0.74
SMCO4-202ENST00000525141 MRI1Q9BV20 369 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 FGF23Q9GZV9 251 aaPredicted RBP10.4□□□□□ -0.74
SMCO4-202ENST00000525141 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 DUSP21Q9H596 190 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 OR5V1Q9UGF6 321 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 HHLA2Q9UM44 414 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 PCDHGB5Q9Y5G0 923 aa10.4□□□□□ -0.74
SMCO4-202ENST00000525141 TRBV2A0A0J9YWF9 115 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 LOC107986453A0A1B0GWG9 222 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OR5B21A6NL26 309 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 PTGES3LE9PB15 166 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OGG1O15527 345 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 DENRO43583 198 aaKnown RBP10.39□□□□□ -0.75
SMCO4-202ENST00000525141 ZFPL1O95159 310 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 CDK1P06493 297 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 GNG3P63215 75 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 SLC35A2P78381 396 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 ARMCX4Q5H9R4 360 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OR2G6Q5TZ20 316 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 FAM90A1Q86YD7 464 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF676Q8N7Q3 588 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 NANOGP1Q8N7R0 232 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OR8B3Q8NGG8 313 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 OR8B2Q96RD0 313 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 CDCA4Q9BXL8 241 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 COMMD4Q9H0A8 199 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 PRDM13Q9H4Q3 707 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 Q9H521 79 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 PLEKHA1Q9HB21 404 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 SMURF1Q9HCE7 757 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 ERGIC3Q9Y282 383 aa10.39□□□□□ -0.75
SMCO4-202ENST00000525141 IGHV3OR15-7A0A075B7D8 119 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 A0A1B0GW55 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 SERPINA3P01011 423 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 GYPAP02724 150 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L2P0CJ85 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L3P0CJ86 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L4P0CJ87 422 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L5P0CJ88 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L6P0CJ89 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L7P0CJ90 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 MMP9P14780 707 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 PRTN3P24158 256 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 CRHBPP24387 322 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 GTF2A1P52655 376 aaPredicted RBP10.38□□□□□ -0.75
SMCO4-202ENST00000525141 FGF12P61328 243 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 CDK5R1Q15078 307 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 CEP78Q5JTW2 689 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 RBM48Q5RL73 367 aaKnown RBP10.38□□□□□ -0.75
SMCO4-202ENST00000525141 TEX36Q5VZQ5 186 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
SMCO4-202ENST00000525141 WDR82Q6UXN9 313 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 MOB3CQ70IA8 216 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 UTS2BQ765I0 119 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 GATAD2BQ8WXI9 593 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 CNBD2Q96M20 576 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 OR51I2Q9H344 312 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 TRIM36Q9NQ86 728 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 DUX4Q9UBX2 424 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 CLN8Q9UBY8 286 aa10.38□□□□□ -0.75
SMCO4-202ENST00000525141 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 A6NIN4 97 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 A6NLC8 198 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF732B4DXR9 585 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 CDIPTO14735 213 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 GATBO75879 557 aaKnown RBP10.37□□□□□ -0.75
SMCO4-202ENST00000525141 HKR1P10072 659 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 GPM6AP51674 278 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 WNT4P56705 351 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 TAS2R43P59537 309 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 ACTG1P63261 375 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 BAMBIQ13145 260 aa10.37□□□□□ -0.75
SMCO4-202ENST00000525141 UBE2V2Q15819 145 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms