RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 H2AFB1P0C5Y9 115 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 HKR1P10072 659 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF708P17019 499 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 CRYGSP22914 178 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 IL32P24001 234 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 PJVKQ0ZLH3 352 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 PLXDC2Q6UX71 529 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 FOXRED2Q8IWF2 684 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 SPSB1Q96BD6 273 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 SAT2Q96F10 170 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 SMIM8Q96KF7 97 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 ADAT1Q9BUB4 502 aaKnown RBP9.66□□□□□ -0.86
HDAC9-228ENST00000524023 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 METTL9Q9H1A3 318 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 TLNRD1Q9H1K6 362 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 DECR2Q9NUI1 292 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
HDAC9-228ENST00000524023 CRYM-AS1A6NIL9 109 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SGCEO43556 437 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SPRY1O43609 319 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SYNGR3O43761 229 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 ANGPTL7O43827 346 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 EIF5AP63241 154 aaKnown RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 RAB35Q15286 201 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM88Q6PEY1 159 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 RPS19BP1Q86WX3 136 aaKnown RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SGPP2Q8IWX5 399 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM156Q8N614 296 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM231Q9H6L2 316 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 UQCC1Q9NVA1 299 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 EDARQ9UNE0 448 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TNRC6BQ9UPQ9 1833 aaKnown RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 IGKV1-27A0A075B6S5 117 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 FAM230AA0A1W2PPH8 454 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 CBR3O75828 277 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 OR5H8P0DN80 308 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 RCC1P18754 421 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 HGFACQ04756 655 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 CHAF1BQ13112 559 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 RSU1Q15404 277 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TAF9Q16594 264 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 OR2A2Q6IF42 318 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 H3F3CQ6NXT2 135 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 HAGHLQ6PII5 290 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 GPR137CQ8N3F9 429 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 FNDC9Q8TBE3 224 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 REEP6Q96HR9 211 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 FAAP24Q9BTP7 215 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SF3B5Q9BWJ5 86 aaKnown RBP9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SEC11CQ9BY50 192 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 HRH4Q9H3N8 390 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 LIME1Q9H400 295 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 HPF1Q9NWY4 346 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 NDRG3Q9UGV2 375 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 AK3Q9UIJ7 227 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 TUBD1Q9UJT1 453 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 PILRBQ9UKJ0 227 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 PADI1Q9ULC6 663 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 HSF4Q9ULV5 492 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 SIT1Q9Y3P8 196 aa9.65□□□□□ -0.86
HDAC9-228ENST00000524023 C9J4A7 227 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 NDUFA2O43678 99 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 LRP3O75074 770 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CST2P09228 141 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 RPL12P30050 165 aaKnown RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 RRADP55042 308 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 MLF1P58340 268 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF468Q5VIY5 522 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 EIF5AL1Q6IS14 154 aaKnown RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF774Q6NX45 483 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 AGBL5Q8NDL9 886 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 RHOFQ9HBH0 211 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 GJE1A6NN92 205 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 K7EPK0 472 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 MASP2O00187 686 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 DNPH1O43598 174 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 DEDDO75618 318 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 SNAPINO95295 136 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 IFNA21P01568 189 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CCL4P13236 92 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 NTF4P34130 210 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 LPAR6P43657 344 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CAV2P51636 162 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 B3GALT5-AS1P59052 145 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 RAC3P60763 192 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 CNN3Q15417 329 aaKnown RBP9.64□□□□□ -0.87
HDAC9-228ENST00000524023 HFEQ30201 348 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 GGNBP1Q5YKI7 109 aa9.64□□□□□ -0.87
HDAC9-228ENST00000524023 PMS2CLQ68D20 193 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms