RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 RPS10-NUDT3A0A1W2PQS6 291 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 HTR3EA5X5Y0 456 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OOEPA6NGQ2 149 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 GGT3PA6NGU5 568 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 FAM220BPB1ANY3 271 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 H0YHG0 523 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DCTN6O00399 190 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DVL1O14640 695 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 FFAR1O14842 300 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PIN1P1O15428 100 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 AHCYL1O43865 530 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 KRT34O76011 436 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 NDUFB2O95178 105 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PPP1R3DO95685 299 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PAHP00439 452 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ACSM4P0C7M7 580 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L2P0CJ85 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L3P0CJ86 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L4P0CJ87 422 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L5P0CJ88 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L6P0CJ89 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L7P0CJ90 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DCTDP32321 178 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 GGT2P36268 569 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PSMB10P40306 273 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 CD200P41217 278 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 CDKN2AP42771 156 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ENTPD1P49961 510 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DLX1P56177 255 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 GMFBP60983 142 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 SELENOWP63302 87 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ELF3P78545 371 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 KLRD1Q13241 179 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 FGD3Q5JSP0 725 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 AGBL2Q5U5Z8 902 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 GPR139Q6DWJ6 353 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DNM1P34Q6PK57 102 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4L9Q6RFH8 374 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 Q6ZTK2 550 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ZNF367Q7RTV3 350 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 FAM122BQ7Z309 247 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OFCC1Q8IZS5 231 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 FGFRL1Q8N441 504 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PNKDQ8N490 385 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ZSCAN4Q8NAM6 433 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OR2T12Q8NG77 320 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OR8J3Q8NGG0 315 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OR2AJ1Q8NGZ0 328 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OR2AE1Q8NHA4 323 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 MRAPQ8TCY5 172 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ACOT11Q8WXI4 607 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ERGIC1Q969X5 290 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 OTULINQ96BN8 352 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 RSRC1Q96IZ7 334 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ZNF583Q96ND8 569 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 CCL13Q99616 98 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 ADAT1Q9BUB4 502 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 SIRPDQ9H106 197 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 PPA2Q9H2U2 334 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 NMNAT1Q9HAN9 279 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 BATF3Q9NR55 127 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 INTS9Q9NV88 658 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 AURKCQ9UQB9 309 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 SIGLEC9Q9Y336 463 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 LHFPL6Q9Y693 200 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 A3GALT2U3KPV4 340 aa4.29□□□□□ -1.72
CTNNA1-239ENST00000523685 MEIOCA2RUB1 952 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CD300LBA8K4G0 201 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 NPIPB11E5RHQ5 1161 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 H3BNX3 289 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 M0R135 149 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 FXYD1O00168 92 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 RGS11O94810 467 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 FSTL3O95633 263 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SERPINA1P01009 418 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 FBP1P09467 338 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 TROVE2P10155 538 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 MYF6P23409 242 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 EEF1B2P24534 225 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CRABP1P29762 137 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 GABRA5P31644 462 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 MDH1P40925 334 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 P2RX3P56373 397 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 HIST1H3AP68431 136 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ZNF92Q03936 586 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 COX10Q12887 443 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 TRAP1Q12931 704 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ECH1Q13011 328 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SNCBQ16143 134 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 LY6EQ16553 131 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 RSPO1Q2MKA7 263 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 SNAI3Q3KNW1 292 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 CDONQ4KMG0 1287 aa4.28□□□□□ -1.72
CTNNA1-239ENST00000523685 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms