RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 RPS19P39019 145 aaKnown RBP13.71□□□□□ -0.21
LSM1-204ENST00000522515 SERPINB10P48595 397 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 IL24Q13007 206 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 DEFB113Q30KQ7 82 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 SLC25A26Q70HW3 274 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 OR4D6Q8NGJ1 314 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 NDNFQ8TB73 568 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 TNFAIP8L1Q8WVP5 186 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 FOXRED1Q96CU9 486 aaPredicted RBP13.71□□□□□ -0.21
LSM1-204ENST00000522515 BCL7BQ9BQE9 202 aa13.71□□□□□ -0.21
LSM1-204ENST00000522515 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
LSM1-204ENST00000522515 TANC2Q9HCD6 1990 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 IGKV1-12A0A0C4DH73 117 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 C3orf80F5H4A9 247 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 SSX4O60224 188 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 RP2O75695 350 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 CYB5R3P00387 301 aaPredicted RBP13.71□□□□□ -0.22
LSM1-204ENST00000522515 IGKV1D-12P01611 117 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 TMEM225BP0DP42 221 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 PTGFRP43088 359 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 SPCS2Q15005 226 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 C1orf100Q5SVJ3 147 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 BATF2Q8N1L9 274 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.22
LSM1-204ENST00000522515 OR51F2Q8NH61 342 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 NINJ1Q92982 152 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 C12orf43Q96C57 262 aaKnown RBP13.71□□□□□ -0.22
LSM1-204ENST00000522515 ZNF488Q96MN9 340 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 UQCC2Q9BRT2 126 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 FAM192AQ9GZU8 254 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 BEX4Q9NWD9 120 aaPredicted RBP13.71□□□□□ -0.22
LSM1-204ENST00000522515 MTCH1Q9NZJ7 389 aa13.71□□□□□ -0.22
LSM1-204ENST00000522515 ITPR2Q14571 2701 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 SMIM31A0A1B0GVY4 71 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 AKR7A2O43488 359 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 NOL3O60936 208 aaKnown RBP13.7□□□□□ -0.22
LSM1-204ENST00000522515 IL1AP01583 271 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 PSMD7P51665 324 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
LSM1-204ENST00000522515 ZNF181Q2M3W8 571 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 HFEQ30201 348 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 CDH24Q86UP0 819 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 GCSAMQ8N6F7 178 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 ZNF525Q8N782 197 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 OR11L1Q8NGX0 322 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 ZNF671Q8TAW3 534 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 SLAMF9Q96A28 289 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 MBD6Q96DN6 1003 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 RNF7Q9UBF6 113 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 RSL24D1Q9UHA3 163 aaKnown RBP13.7□□□□□ -0.22
LSM1-204ENST00000522515 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
LSM1-204ENST00000522515 POLDIP2Q9Y2S7 368 aa13.7□□□□□ -0.22
LSM1-204ENST00000522515 NOTOA8MTQ0 251 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 F8VVB4 439 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 F8VWA3 439 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 TMEM178BH3BS89 294 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 SLC17A2O00624 439 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 SLC22A1O15245 554 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 LHBP01229 141 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 PGA5P0DJD9 388 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 EGR1P18146 543 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 HTR2CP28335 458 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 CFHR2P36980 270 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 NPBWR2P48146 333 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 GMFBP60983 142 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 FAM201AQ5SY85 155 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 HES5Q5TA89 166 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 USP43Q70EL4 1123 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 MKXQ8IYA7 352 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 ZSCAN4Q8NAM6 433 aaPredicted RBP13.69□□□□□ -0.22
LSM1-204ENST00000522515 OR6M1Q8NGM8 313 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 OR10Z1Q8NGY1 313 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
LSM1-204ENST00000522515 NDUFA13Q9P0J0 144 aa13.69□□□□□ -0.22
LSM1-204ENST00000522515 ANKRD17O75179 2603 aaKnown RBP13.69□□□□□ -0.22
LSM1-204ENST00000522515 PDZD2O15018 2839 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 LRRC30A6NM36 301 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 IFITM5A6NNB3 132 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 WNT9BO14905 357 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 CYB5AP00167 134 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 SLC2A2P11168 524 aaPredicted RBP13.68□□□□□ -0.22
LSM1-204ENST00000522515 IRF2P14316 349 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 CLDN12P56749 244 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 RIN1Q13671 783 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 CARTPTQ16568 116 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 AWAT2Q6E213 333 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 SFXN4Q6P4A7 337 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
LSM1-204ENST00000522515 BOLLQ8N9W6 283 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms