RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MESTQ5EB52 335 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CIB3Q96Q77 187 aaPredicted RBP12.29□□□□□ -0.44
SYNPO-205ENST00000522122 TERTO14746 1132 aaKnown RBP12.29□□□□□ -0.44
SYNPO-205ENST00000522122 TXNDC12O95881 172 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 COX5AP20674 150 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 GPR12P47775 334 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 TMED3Q9Y3Q3 217 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 LRRC30A6NM36 301 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A8P0DMV1 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A9P0DMV2 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CSF2RBP32927 897 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 GUK1Q16774 197 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A2Q5DJT8 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A1Q5HYN5 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CARFQ8N187 725 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 CT45A3Q8NHU0 189 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF107Q9UII5 783 aaPredicted RBP12.29□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF391Q9UJN7 358 aa12.29□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF321PQ8N8H1 164 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 EML2O95834 649 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 RNF212Q495C1 297 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 CISD2Q8N5K1 135 aaKnown RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 C20orf202A1L168 122 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 NDUFB7P17568 137 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 AKR1C3P42330 323 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 SLC37A1P57057 533 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ZADH2Q8N4Q0 377 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 PMS2P1A4D2B8 440 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 K7EQS6 105 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 APOA2P02652 100 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ACAA2P42765 397 aaKnown RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 SCGB2A2Q13296 93 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ACOT6Q3I5F7 207 aaPredicted RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 MIDNQ504T8 468 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 WIPI1Q5MNZ9 446 aaPredicted RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 PRSS54Q6PEW0 395 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ZNF705AQ6ZN79 300 aaPredicted RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 ANKRD37Q7Z713 158 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 OR5M9Q8NGP3 310 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 KISS1RQ969F8 398 aaPredicted RBP12.28□□□□□ -0.44
SYNPO-205ENST00000522122 LURAP1Q96LR2 239 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 DECR2Q9NUI1 292 aa12.28□□□□□ -0.44
SYNPO-205ENST00000522122 CLEC18AA5D8T8 446 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 CDC14BO60729 498 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 IL3RAP26951 378 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 GABRA4P48169 554 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 CLEC18CQ8NCF0 446 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 SLC39A7Q92504 469 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 KCNK15Q9H427 330 aa12.27□□□□□ -0.44
SYNPO-205ENST00000522122 OR3A4PP47883 348 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 HABP2Q14520 560 aaPredicted RBP12.27□□□□□ -0.45
SYNPO-205ENST00000522122 HLA-BQ31612 363 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
SYNPO-205ENST00000522122 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 OPA3Q9H6K4 179 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 CACNA1IQ9P0X4 2223 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 TCRBV16S1A1N1A0A5B0 115 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 S100A7P31151 101 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
SYNPO-205ENST00000522122 H3F3AP84243 136 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 PDCD1Q15116 288 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 CORO2AQ92828 525 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 SARAFQ96BY9 339 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 PIK3IP1Q96FE7 263 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 HRKO00198 91 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 NPBWR1P48145 328 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 GPM6AP51674 278 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 C20orf196Q8IYI0 205 aa12.27□□□□□ -0.45
SYNPO-205ENST00000522122 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 hCG_1809904A0A1W2PP81 198 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PPE2 198 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PR64 198 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PRV1 198 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 H3BMH7 237 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 CRYAAP02489 173 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 PGA3P0DJD8 388 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 VSIG10L2P0DP72 767 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 CTRB1P17538 263 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 KCNJ3P48549 501 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 NANOS3P60323 173 aaKnown RBP12.26□□□□□ -0.45
SYNPO-205ENST00000522122 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 GUSBP11Q6P575 273 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms