RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 OPN3Q9H1Y3 402 aaPredicted RBP5.84□□□□□ -1.47
SPIDR-215ENST00000521798 EFCAB1Q9HAE3 211 aa5.84□□□□□ -1.47
SPIDR-215ENST00000521798 ABCD2Q9UBJ2 740 aa5.84□□□□□ -1.47
SPIDR-215ENST00000521798 HDGFL3Q9Y3E1 203 aa5.84□□□□□ -1.47
SPIDR-215ENST00000521798 OTOGQ6ZRI0 2925 aa5.84□□□□□ -1.48
SPIDR-215ENST00000521798 MPDZO75970 2070 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 IGKV1D-42A0A075B6H8 117 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 A0A0B4J2E0 115 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 A0A1B0GX12 115 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 RAMP1O60894 148 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 DCTN3O75935 186 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 PDE5AO76074 875 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 THY1P04216 161 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 CXCR1P25024 350 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 AGTR1P30556 359 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 KDELR2P33947 212 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 GSK3BP49841 420 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 CTBP2P56545 445 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 RGS8P57771 180 aaPredicted RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 PSME3P61289 254 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 H3F3AP84243 136 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 DHODHQ02127 395 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 LIPEQ05469 1076 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 EIF2B1Q14232 305 aaKnown RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 OR1Q1Q15612 314 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 CARD17Q5XLA6 110 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 AWAT2Q6E213 333 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 SPSB3Q6PJ21 355 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 NUFIP2Q7Z417 695 aaKnown RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 TSEN54Q7Z6J9 526 aaKnown RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 BIVMQ86UB2 503 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 RBM45Q8IUH3 476 aaKnown RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 MICU2Q8IYU8 434 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 OR52E4Q8NGH9 312 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 OR6K3Q8NGY3 331 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 ZNF300Q96RE9 604 aaPredicted RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 POTEKPQ9BYX7 375 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 C12orf10Q9HB07 376 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 KLHL28Q9NXS3 571 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 TMEM181Q9P2C4 612 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 PROCRQ9UNN8 238 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 TRAPPC4Q9Y296 219 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 AP3M1Q9Y2T2 418 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 CHTOPQ9Y3Y2 248 aaKnown RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 ZNF469Q96JG9 3925 aaPredicted RBP5.83□□□□□ -1.48
SPIDR-215ENST00000521798 MYO9AB2RTY4 2548 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 FREM1Q5H8C1 2179 aa5.83□□□□□ -1.48
SPIDR-215ENST00000521798 PRR14LQ5THK1 2151 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 CELSR1Q9NYQ6 3014 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 CREBBPQ92793 2442 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 IGKV3D-15A0A087WSY6 115 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 A0A087WUJ7 227 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 A0A087WW49 117 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ARPC4-TTLL3A0A0A6YYG9 625 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 FTCDNL1E5RQL4 147 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 K7EQD1 137 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 EIF1BO60739 113 aaKnown RBP5.82□□□□□ -1.48
SPIDR-215ENST00000521798 LYPD3O95274 346 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ALPLP05186 524 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 NCK1P16333 377 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 SELEP16581 610 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 CCKARP32238 428 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 P2RY4P51582 365 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 SH3BGRP55822 239 aaPredicted RBP5.82□□□□□ -1.48
SPIDR-215ENST00000521798 OR2B6P58173 313 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 NCALDP61601 193 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 OR7A5Q15622 319 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 SNAI3Q3KNW1 292 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 C1orf140Q5VVS0 124 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ZNF613Q6PF04 617 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ULK3Q6PHR2 472 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 PAQR6Q6TCH4 344 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 TFAP2EQ6VUC0 442 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 LINC01560Q8TB33 94 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 PCNPQ8WW12 178 aaKnown RBP5.82□□□□□ -1.48
SPIDR-215ENST00000521798 DNAJA4Q8WW22 397 aaPredicted RBP5.82□□□□□ -1.48
SPIDR-215ENST00000521798 RASSF5Q8WWW0 418 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 SLC38A4Q969I6 547 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ZHX1-C8orf76Q96EF9 292 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 MCHR1Q99705 422 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 TMEM27Q9HBJ8 222 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 RPS6KB2Q9UBS0 482 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 PPP1R3CQ9UQK1 317 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ANKRD17O75179 2603 aaKnown RBP5.82□□□□□ -1.48
SPIDR-215ENST00000521798 ROS1P08922 2347 aa5.82□□□□□ -1.48
SPIDR-215ENST00000521798 CPSF4LA6NMK7 179 aaKnown RBP5.81□□□□□ -1.48
SPIDR-215ENST00000521798 P2RY10O00398 339 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 CXCR6O00574 342 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 NDUFAB1O14561 156 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 CHP2O43745 196 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 UPK3AO75631 287 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 IFNA14P01570 189 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 H2BFMP0C1H6 154 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 PTNP21246 168 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 UGT2B10P36537 528 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 CD79BP40259 229 aa5.81□□□□□ -1.48
SPIDR-215ENST00000521798 RPS5P46782 204 aaKnown RBP5.81□□□□□ -1.48
SPIDR-215ENST00000521798 OR1E2P47887 323 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms