RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TMEM72A0PK05 275 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ANKRD30BLA7E2S9 258 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 HNRNPCL3B7ZW38 293 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 E5RGE8 158 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FTCDNL1E5RQL4 147 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 H0Y8G0 127 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 K7EQM0 130 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF701M0R085 212 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SYT7O43581 403 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 NPIPB7O75200 414 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 GLRA3O75311 464 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINI2O75830 405 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 PIAS1O75925 651 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINE1P05121 402 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINA5P05154 406 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 BPGMP07738 259 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FRMD6-AS1P0C7T7 363 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 HNRNPCL4P0DMR1 293 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CLUP10909 449 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 RPA2P15927 270 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF26P17031 533 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 UQCRC2P22695 453 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 LCN1P31025 176 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FCGR2BP31994 310 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 DUTP33316 252 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 AQP5P55064 265 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 UBE2NP61088 152 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 HERV-K104P63124 156 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 BASP1P80723 227 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 STX3Q13277 289 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FASTKD3Q14CZ7 662 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CEACAM16Q2WEN9 425 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CNPY1Q3B7I2 92 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CCDC153Q494R4 210 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF404Q494X3 552 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 PHLDA2Q53GA4 152 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FAM201AQ5SY85 155 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 LDLRAD2Q5SZI1 272 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 OGFRL1Q5TC84 451 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 NCR3LG1Q68D85 454 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FAM71E1Q6IPT2 247 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 METAP1DQ6UB28 335 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 GOLGA7Q7Z5G4 137 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SATL1Q86VE3 508 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 RNF130Q86XS8 419 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 PDZD9Q8IXQ8 264 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FAM9CQ8IZT9 166 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SPICQ8N5J4 248 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 LY6G5BQ8NDX9 201 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 FBXO36Q8NEA4 188 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 OR6M1Q8NGM8 313 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF519Q8TB69 540 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SYNPRQ8TBG9 265 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 C16orf78Q8WTQ4 265 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 PHLDA1Q8WV24 401 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ST8SIA1Q92185 356 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CDKL2Q92772 493 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 LHX4Q969G2 390 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 PINX1Q96BK5 328 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 TIMD4Q96H15 378 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 C3orf30Q96M34 536 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF607Q96SK3 696 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 S1PR3Q99500 378 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ARHGDIGQ99819 225 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SF3B5Q9BWJ5 86 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 MRPS26Q9BYN8 205 aaKnown RBP2.98□□□□□ -1.93
VPS13B-208ENST00000521037 TRIM15Q9C019 465 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 POPDC3Q9HBV1 291 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 GIN1Q9NXP7 522 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM181Q9P2C4 612 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 DCDC2Q9UHG0 476 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 SLC7A8Q9UHI5 535 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 CHMP2BQ9UQN3 213 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 NSG2Q9Y328 171 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 TMED5Q9Y3A6 229 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 OR2W1Q9Y3N9 320 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF780BQ9Y6R6 833 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 IGLV5-39A0A0G2JS06 123 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 RPS10-NUDT3A0A1W2PQS6 291 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 FAM159BA6NKW6 160 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM114B3SHH9 223 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF587BE7ETH6 402 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 LGALS8O00214 317 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 EIF4E2O60573 245 aaKnown RBP2.97□□□□□ -1.93
VPS13B-208ENST00000521037 KDM4BO94953 1096 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 PDYNP01213 254 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 IGF2P01344 180 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 GP9P14770 177 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 IDO1P14902 403 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 B4GALT1P15291 398 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 TNFRSF1BP20333 461 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 BGNP21810 368 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINB5P36952 375 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 MDH2P40926 338 aaKnown RBP2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ELK3P41970 407 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 ERFP50548 548 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 PSMD7P51665 324 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 OR2B6P58173 313 aa2.97□□□□□ -1.93
VPS13B-208ENST00000521037 BRWD1-AS2P59051 145 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms