RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF74Q16587 644 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 RFX4Q33E94 735 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 PLAC9Q5JTB6 97 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 ZNF613Q6PF04 617 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 TTC33Q6PID6 262 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 DHRS4L2Q6PKH6 230 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 OVCH2Q7RTZ1 564 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SLC36A1Q7Z2H8 476 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SLC30A8Q8IWU4 369 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 MSRB3Q8IXL7 192 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 CBR4Q8N4T8 237 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 DHRSXQ8N5I4 330 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 MINDY2Q8NBR6 621 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 OR52M1Q8NGK5 317 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 FANK1Q8TC84 345 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 CAPSLQ8WWF8 208 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 TFAP2CQ92754 450 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 APOBEC3DQ96AK3 386 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 DGCR14Q96DF8 476 aaKnown RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 PYURFQ96I23 114 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 AJUBAQ96IF1 538 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 RDH12Q96NR8 316 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 RBP7Q96R05 134 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 NEU1Q99519 415 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 ALG12Q9BV10 488 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 MRPS26Q9BYN8 205 aaKnown RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 ANKRD60Q9BZ19 345 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 PRSS22Q9GZN4 317 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SEMA6AQ9H2E6 1030 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 METTL8Q9H825 291 aaKnown RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SMURF1Q9HCE7 757 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 CENPMQ9NSP4 180 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 C20orf141Q9NUB4 165 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SLC25A37Q9NYZ2 338 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 DNAJB9Q9UBS3 223 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 FBXL7Q9UJT9 491 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SAMD4AQ9UPU9 718 aaKnown RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SF3B6Q9Y3B4 125 aaKnown RBP3.96□□□□□ -1.78
SDCBP-207ENST00000520168 UGT2A1Q9Y4X1 527 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 HERC2O95714 4834 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 RYR1P21817 5038 aa3.96□□□□□ -1.78
SDCBP-207ENST00000520168 SAC3D1A6NKF1 404 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 LRRN3E7EW58 273 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 F5H5P2 479 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 BLOC1S5-TXNDC5H3BN57 136 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 WRBO00258 174 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 SOCS2O14508 198 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 SGCEO43556 437 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 FAM20BO75063 409 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 WBP4O75554 376 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 TRMUO75648 421 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 GLCEO94923 617 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 RPP14O95059 124 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 SLC2A10O95528 541 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 PTBP3O95758 552 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CH25HO95992 272 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 IGF2P01344 180 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CHRM2P08172 466 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 HSMCR30P0CW71 290 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 MUC1P15941 1255 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 NCK1P16333 377 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 HOXB9P17482 250 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 MYF6P23409 242 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 FPR3P25089 353 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 LAP3P28838 519 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CD1BP29016 333 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CDAP32320 146 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 KDELR2P33947 212 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CAPGP40121 348 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 FHITP49789 147 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 MVDP53602 400 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 UGT2B15P54855 530 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CDH12P55289 794 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 RPL18Q07020 188 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 IL24Q13007 206 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 ECH1Q13011 328 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 MAB21L1Q13394 359 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 IL18Q14116 193 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 SELPLGQ14242 412 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CNN3Q15417 329 aaKnown RBP3.95□□□□□ -1.78
SDCBP-207ENST00000520168 LY6EQ16553 131 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 TIGD6Q17RP2 521 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 MICBQ29980 383 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 VMACQ2NL98 169 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 SLC36A3Q495N2 470 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 LRRC10Q5BKY1 277 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 TCTEX1D4Q5JR98 221 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 CLEC12AQ5QGZ9 265 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 FAM201AQ5SY85 155 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 TTC23Q5W5X9 447 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 FOXL2NBQ6ZUU3 175 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 ARMC8Q8IUR7 673 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 OR5AS1Q8N127 324 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 C11orf65Q8NCR3 313 aa3.95□□□□□ -1.78
SDCBP-207ENST00000520168 OR5AU1Q8NGC0 362 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms