RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 ANXA10Q9UJ72 324 aa3.19□□□□□ -1.9
HMGB1P46-201ENST00000520062 BRCA1P38398 1863 aaKnown RBP3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 IQCF5A8MTL0 148 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 MPZL1O95297 269 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 WISP3O95389 354 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 GIMD1P0DJR0 217 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 AZU1P20160 251 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 GRB2P62993 217 aaKnown RBP3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 DMTNQ08495 405 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 STX4Q12846 297 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 COX19Q49B96 90 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 FAM222AQ5U5X8 452 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 CLEC19AQ6UXS0 136 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 SHISA6Q6ZSJ9 500 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 ATPAF2Q8N5M1 289 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 METTL8Q9H825 291 aaKnown RBP3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR2S2Q9NQN1 319 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 MAP3K19Q56UN5 1328 aa3.18□□□□□ -1.9
HMGB1P46-201ENST00000520062 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 TMEM72A0PK05 275 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ERICH2A1L162 156 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ISPDA4D126 451 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF850A8MQ14 1090 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 UPK1AO00322 258 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 IGKV1D-16P01601 117 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR4Q2P0C623 313 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 HLA-GP17693 338 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 NELFEP18615 380 aaKnown RBP3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 HTR2BP41595 481 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 PMVKQ15126 192 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ANGPT1Q15389 498 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 CLEC6AQ6EIG7 209 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 UGT2A3Q6UWM9 527 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 LRRC8AQ8IWT6 810 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ORMDL3Q8N138 153 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 SPICQ8N5J4 248 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 HGDQ93099 445 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 CPNE4Q96A23 557 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF75AQ96N20 296 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 SPACA5Q96QH8 159 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 METTL26Q96S19 204 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 BEX2Q9BXY8 128 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 TBL1XR1Q9BZK7 514 aa3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 USP42Q9H9J4 1324 aaKnown RBP3.17□□□□□ -1.9
HMGB1P46-201ENST00000520062 PLA2R1Q13018 1463 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 SIGLEC1Q9BZZ2 1709 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 C7orf66A4D0T2 115 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 A8MWL6 223 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 LDOC1O95751 146 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 MAS1P04201 325 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 SLC18A1P54219 525 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 TAS2R43P59537 309 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 PITPNAQ00169 270 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 CEACAM16Q2WEN9 425 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF880Q6PDB4 577 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 UNQ9165/PRO28630Q6UXU0 137 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 H1FOOQ8IZA3 346 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZNF101Q8IZC7 436 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR2Z1Q8NG97 314 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 OR4K2Q8NGD2 314 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ANGPTL6Q8NI99 470 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZFP3Q96NJ6 502 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 NXF2Q9GZY0 626 aaKnown RBP3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 CHMP4BQ9H444 224 aaKnown RBP3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 ZSCAN16Q9H4T2 348 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 TMBIM4Q9HC24 238 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 DNAJC27Q9NZQ0 273 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 FADS3Q9Y5Q0 445 aa3.16□□□□□ -1.9
HMGB1P46-201ENST00000520062 A0A0G2JMP0 313 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 A0A0X1KG70 313 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 ENSAO43768 121 aaKnown RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 IGKV3-11P04433 115 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 IL4P05112 153 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 NQO2P16083 231 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF32P17041 273 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 RAB38P57729 211 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 RPL10AP62906 217 aaKnown RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 DMC1Q14565 340 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR4D1Q15615 310 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 LINC00303Q3SY05 128 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 CLEC12AQ5QGZ9 265 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 MORN3Q6PF18 240 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 Q6ZT83 130 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 CCNYL1Q8N7R7 359 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLC35G3Q8N808 338 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 ACBD4Q8NC06 268 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR8G5Q8NG78 346 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 RTN4IP1Q8WWV3 396 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF396Q96N95 335 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 SERPINB11Q96P15 392 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 QKIQ96PU8 341 aaKnown RBP eCLIP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms