RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 SERTAD4Q9NUC0 356 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 KIR2DS1A0A191URI9 304 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PIN1P1O15428 100 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 CSF2RBP32927 897 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 KIR2DS4P43632 304 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 POLR2GP62487 172 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 KIR2DS1Q14954 304 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PP6455Q8WZ26 134 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 TMEM68Q96MH6 324 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PCDHGA9Q9Y5G4 932 aaKnown RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 CATR1Q13166 79 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 DEGS2Q6QHC5 323 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 ARRDC1Q8N5I2 433 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 DTWD2Q8NBA8 298 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 OR5M9Q8NGP3 310 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 SCN5AQ14524 2016 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 RALGAPA1Q6GYQ0 2036 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 LIPT2A6NK58 231 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 MPC2O95563 127 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 PAX6P26367 422 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 C21orf62-AS1Q17RA5 79 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 D2HGDHQ8N465 521 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 ARHGEF39Q8N4T4 335 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 OR1S2Q8NGQ3 325 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF721Q8TF20 911 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 OPN4Q9UHM6 478 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
SYNPO-204ENST00000519664 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 BCL2L11O43521 198 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 LMX1BO60663 402 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 BGLAPP02818 100 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 HOXD4P09016 255 aaPredicted RBP10.37□□□□□ -0.75
SYNPO-204ENST00000519664 CCL3P10147 92 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 RAB4AP20338 218 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 KIR3DL2P43630 455 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 RAB31Q13636 194 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 GAB4Q2WGN9 574 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 OR10D3Q8NH80 312 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 CMTM3Q96MX0 182 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 WNT16Q9UBV4 365 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 HBG1P69891 147 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 HBG2P69892 147 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 TBC1D28Q2M2D7 210 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 PABPC1L2AQ5JQF8 200 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 OR2T2Q6IF00 324 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 HIST2H3AQ71DI3 136 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 OR8U1Q8NH10 309 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 ASB10Q8WXI3 467 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 NIPSNAP3BQ9BS92 247 aa10.37□□□□□ -0.75
SYNPO-204ENST00000519664 SERPINE3A8MV23 424 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SIGLEC5O15389 551 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ONECUT2O95948 504 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 AADACP22760 399 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SNCAP37840 140 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SRPXP78539 464 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ZXDAP98168 799 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SIGLEC14Q08ET2 396 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 PLGLAQ15195 96 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 Q5BKY6 102 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 CD200R1LQ6Q8B3 271 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 MAFAQ8NHW3 353 aaPredicted RBP10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ASB13Q8WXK3 278 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 TRIB1Q96RU8 372 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SARGQ9BW04 601 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 OR6C6A6NF89 314 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 DHRS3O75911 302 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 TBPP20226 339 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 LIMK1P53667 647 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 TLE4Q04727 773 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 OR8G1Q15617 311 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ADIRFQ15847 76 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 C3AR1Q16581 482 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 OR11G2Q8NGC1 345 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 EXTL1Q92935 676 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 GHITMQ9H3K2 345 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 AK3Q9UIJ7 227 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SHISA7A6NL88 538 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 CDC14BO60729 498 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 CD37P11049 281 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 PI4KAP42356 2102 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ALKBH6Q3KRA9 238 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 LHFPL2Q6ZUX7 228 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 THNSL2Q86YJ6 484 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 SLC26A10Q8NG04 563 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 RFESDQ8TAC1 157 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 TMEM100Q9NV29 134 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms