RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 ITFG2Q969R8 447 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 RCC1LQ96I51 464 aaKnown RBP12.67□□□□□ -0.38
LMNA-223ENST00000515459 WWC2-AS2Q96NR7 200 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 MUC13Q9H3R2 512 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 F2RL2O00254 374 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 SELENOFO60613 162 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 DUS4LO95620 317 aaKnown RBP12.66□□□□□ -0.38
LMNA-223ENST00000515459 TK1P04183 234 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 PIPP12273 146 aaPredicted RBP12.66□□□□□ -0.38
LMNA-223ENST00000515459 DLX6P56179 175 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 OR12D2P58182 307 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
LMNA-223ENST00000515459 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 MOB3CQ70IA8 216 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 ZNF488Q96MN9 340 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 DGCR6LQ9BY27 220 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
LMNA-223ENST00000515459 A0A0U1RQV5 110 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 WI2-2373I1.2A0A1W2PRP0 233 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 H3BUI4 141 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 SYNGR1O43759 233 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 ATP6V1B1P15313 513 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 CD69Q07108 199 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 RIPPLY1Q0D2K3 151 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 MICAQ29983 383 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 LDLRAD2Q5SZI1 272 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 LCN8Q6JVE9 175 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 OR11H6Q8NGC7 330 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 TEX47Q8TBZ9 253 aa12.65□□□□□ -0.38
LMNA-223ENST00000515459 TSSC4Q9Y5U2 329 aaPredicted RBP12.65□□□□□ -0.38
LMNA-223ENST00000515459 TENM3Q9P273 2699 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 TCRBV4S1A1TA0A5B7 111 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 GSC2O15499 205 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 NOS1APO75052 506 aaPredicted RBP12.64□□□□□ -0.39
LMNA-223ENST00000515459 NXPH2O95156 264 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 RBP4P02753 201 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 ZNF728P0DKX0 622 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
LMNA-223ENST00000515459 AZGP1P25311 298 aaKnown RBP12.64□□□□□ -0.39
LMNA-223ENST00000515459 MAGEA2P43356 314 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 HAAOP46952 286 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
LMNA-223ENST00000515459 CCDC121Q6ZUS5 278 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 TRPM8Q7Z2W7 1104 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 CENPVQ7Z7K6 275 aaPredicted RBP12.64□□□□□ -0.39
LMNA-223ENST00000515459 ZNF573Q86YE8 665 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 PGAM4Q8N0Y7 254 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 CDRT15Q96T59 188 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 TAS2R1Q9NYW7 299 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 OR14J1Q9UGF5 321 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 POLDIP2Q9Y2S7 368 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 KLHDC2Q9Y2U9 406 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 HILPDAQ9Y5L2 63 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 U3KQV3 271 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 DSCAML1Q8TD84 2053 aa12.64□□□□□ -0.39
LMNA-223ENST00000515459 TMEM269A0A1B0GVZ9 245 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 PRR23D1E9PI22 279 aaPredicted RBP12.63□□□□□ -0.39
LMNA-223ENST00000515459 E9PQ18 207 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 H3BN98 237 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 J3QT63 122 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 CLIC3O95833 236 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 NRASP01111 189 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 PRR23D2P0DMB1 279 aaPredicted RBP12.63□□□□□ -0.39
LMNA-223ENST00000515459 IGHV1-8P0DP01 117 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 SLC34A1Q06495 639 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 EGFEM1PQ0D2K5 195 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 ZNF684Q5T5D7 378 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 PLBD1Q6P4A8 553 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 REEP1Q9H902 201 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 FAM206AQ9NX38 181 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 ENPP5Q9UJA9 477 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
LMNA-223ENST00000515459 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
LMNA-223ENST00000515459 K7N7A8 449 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 PRODHO43272 600 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 JUNBP17275 347 aaPredicted RBP12.62□□□□□ -0.39
LMNA-223ENST00000515459 ALOX5APP20292 161 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 EDDM3BP56851 147 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 MINOS1Q5TGZ0 78 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 LCN1P1Q5VSP4 162 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 CD300LDQ6UXZ3 194 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 CYP2R1Q6VVX0 501 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 ASCC1Q8N9N2 400 aaKnown RBP12.62□□□□□ -0.39
LMNA-223ENST00000515459 OR51E1Q8TCB6 317 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 MYDGFQ969H8 173 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 B9D2Q9BPU9 175 aa12.62□□□□□ -0.39
LMNA-223ENST00000515459 NIPSNAP1Q9BPW8 284 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms