RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SLC25A10Q9UBX3 287 aaPredicted RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 A0A1B0GW55 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 hCG_1809904A0A1W2PP81 198 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PPE2 198 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PR64 198 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PRV1 198 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 OR2AT4A6NND4 320 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 H0YAE9 185 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GNGT2O14610 69 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 CST1P01037 141 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 ACAA1P09110 424 aaPredicted RBP5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L2P0CJ85 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L3P0CJ86 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L4P0CJ87 422 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L5P0CJ88 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L6P0CJ89 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L7P0CJ90 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 ATP6V1B1P15313 513 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GLRA1P23415 457 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 ACKR3P25106 362 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GABRA5P31644 462 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GABRA2P47869 451 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GPM6AP51674 278 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 KRTAP10-3P60369 221 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GNG3P63215 75 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 ELF3P78545 371 aaPredicted RBP5.87□□□□□ -1.47
USP46-208ENST00000512656 GINS1Q14691 196 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 AANATQ16613 207 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 KLHL12Q53G59 568 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 FAM76BQ5HYJ3 339 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 SLC35D3Q5M8T2 416 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 KCTD18Q6PI47 426 aaPredicted RBP5.87□□□□□ -1.47
USP46-208ENST00000512656 DEGS2Q6QHC5 323 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4L9Q6RFH8 374 aaPredicted RBP5.87□□□□□ -1.47
USP46-208ENST00000512656 Q6ZTK2 550 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 KRT77Q7Z794 578 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 PIGWQ7Z7B1 504 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 FGFRL1Q8N441 504 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 IQCF1Q8N6M8 205 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 Q8N7P7 452 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 BEND2Q8NDZ0 799 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 OR51G2Q8NGK0 314 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 TNFRSF14Q92956 283 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 SEH1LQ96EE3 360 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 NSL1Q96IY1 281 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 GAFA1Q96PS6 74 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 AMELYQ99218 206 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 FEVQ99581 238 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 WDR13Q9H1Z4 485 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 SEMA6AQ9H2E6 1030 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 SNTG1Q9NSN8 517 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 VNN3Q9NY84 501 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 RASL12Q9NYN1 266 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 ZNF319Q9P2F9 582 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 DUX4Q9UBX2 424 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 LAMP5Q9UJQ1 280 aa5.87□□□□□ -1.47
USP46-208ENST00000512656 A0A0U1RQV5 110 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PRD5 423 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PRF3 423 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PRM7 423 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 OR5B21A6NL26 309 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 H3BUX3 64 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 ANGPTL7O43827 346 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 SELENOFO60613 162 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 ZNF254O75437 659 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 E2F6O75461 281 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 MTRF1O75570 445 aaKnown RBP5.86□□□□□ -1.47
USP46-208ENST00000512656 CSF1P09603 554 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 SELLP14151 372 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 AMY2BP19961 511 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 ALOX5APP20292 161 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 DCTDP32321 178 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 CAPZA1P52907 286 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 RPS7P62081 194 aaKnown RBP5.86□□□□□ -1.47
USP46-208ENST00000512656 GNGT1P63211 74 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 KLRD1Q13241 179 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 DGUOKQ16854 277 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 SMIM21Q3B7S5 101 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 CEACAM21Q3KPI0 293 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 SLC35E4Q6ICL7 350 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 PLBD1Q6P4A8 553 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 COMMD2Q86X83 199 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 TMEM185AQ8NFB2 350 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 OR8B12Q8NGG6 310 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 OR5A2Q8NGI9 324 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 OR4C13Q8NGP0 309 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 FAM110DQ8TAY7 271 aaPredicted RBP5.86□□□□□ -1.47
USP46-208ENST00000512656 ASB9Q96DX5 294 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 DUS3LQ96G46 650 aaKnown RBP5.86□□□□□ -1.47
USP46-208ENST00000512656 SDSLQ96GA7 329 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 NIPSNAP1Q9BPW8 284 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 CHID1Q9BWS9 393 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 MROQ9BYG7 248 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 YIPF3Q9GZM5 350 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 PPA2Q9H2U2 334 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 PPP1R3EQ9H7J1 279 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 YY1AP1Q9H869 796 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 HEXA-AS1Q9H8Q6 139 aa5.86□□□□□ -1.47
USP46-208ENST00000512656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms