RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 BAMBIQ13145 260 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 UBE2V2Q15819 145 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 DEFB112Q30KQ8 113 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 GPR157Q5UAW9 335 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 LPCAT4Q643R3 524 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ACP7Q6ZNF0 438 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 C9orf139Q6ZV77 190 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 LHFPL3Q86UP9 236 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 POC1AQ8NBT0 407 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ZNRF1Q8ND25 227 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 OR2G2Q8NGZ5 317 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 OR10AC1Q8NH08 325 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 LHX4Q969G2 390 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 C4orf36Q96KX1 117 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 FRRS1LQ9P0K9 344 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 MAB21L2Q9Y586 359 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 IGKV1-27A0A075B6S5 117 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 DHRS7CA6NNS2 312 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 SIGLEC5O15389 551 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 CLIC3O95833 236 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ECDO95905 644 aaPredicted RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 LIPFP07098 398 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 PGA5P0DJD9 388 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 NDUFB7P17568 137 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 LRRC10Q5BKY1 277 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 VMO1Q7Z5L0 202 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ACBD7Q8N6N7 88 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 TMEM185AQ8NFB2 350 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ITFG2Q969R8 447 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 PELI1Q96FA3 418 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 DCTN5Q9BTE1 182 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ADI1Q9BV57 179 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 DNTTIP1Q9H147 329 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 CNTD2Q9H8S5 307 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 ISG20L2Q9H9L3 353 aaKnown RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 SIRT7Q9NRC8 400 aa13.59□□□□□ -0.23
DDX41-213ENST00000512027 SLC25A10Q9UBX3 287 aaPredicted RBP13.59□□□□□ -0.23
DDX41-213ENST00000512027 HTR1AP08908 422 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 UBCP0CG48 685 aaKnown RBP13.58□□□□□ -0.24
DDX41-213ENST00000512027 RCN1Q15293 331 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 OR51A4Q8NGJ6 313 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 GCDHQ92947 438 aaPredicted RBP13.58□□□□□ -0.24
DDX41-213ENST00000512027 MED30Q96HR3 178 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 ALG8Q9BVK2 526 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 CHST5Q9GZS9 411 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 TNFRSF19Q9NS68 423 aa13.58□□□□□ -0.24
DDX41-213ENST00000512027 SMPD3Q9NY59 655 aaPredicted RBP13.58□□□□□ -0.24
DDX41-213ENST00000512027 RFPL4AA6NLU0 287 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 SNTNA6NMZ2 147 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 RFPL4AL1F8VTS6 287 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 F8VVB4 439 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 F8VWA3 439 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 NXPH2O95156 264 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 PRTN3P24158 256 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 MPZP25189 248 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 PEX2P28328 305 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 KLRD1Q13241 179 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 SLC9A3R2Q15599 337 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 Q8N7P7 452 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 OR52I1Q8NGK6 324 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 SLAMF9Q96A28 289 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 NRIP2Q9BQI9 281 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 ZNF649Q9BS31 505 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 OR14J1Q9UGF5 321 aa13.57□□□□□ -0.24
DDX41-213ENST00000512027 IGHV1-69DA0A0B4J2H0 117 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 A0A1W2PRD5 423 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 A0A1W2PRF3 423 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 A0A1W2PRM7 423 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 TMEM89A2RUT3 159 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 E9PI62 339 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 HOXA3O43365 443 aaPredicted RBP13.56□□□□□ -0.24
DDX41-213ENST00000512027 MPZL2O60487 215 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 WBP4O75554 376 aaKnown RBP13.56□□□□□ -0.24
DDX41-213ENST00000512027 IGHV1-69P01742 117 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 IGHA1P01876 353 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 CAPZA1P52907 286 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 GALEQ14376 348 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 PDCD1Q15116 288 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 SMIM21Q3B7S5 101 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 FDX2Q6P4F2 183 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 RNF144BQ7Z419 303 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 ZNF555Q8NEP9 628 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 C8orf46Q8TAG6 207 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 CNIH3Q8TBE1 160 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 FGGYQ96C11 551 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 SDSLQ96GA7 329 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 ERVK13-1Q9NX77 482 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 MTCH1Q9NZJ7 389 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 SLC7A11Q9UPY5 501 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms