RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 AKR7A2O43488 359 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ARG1P05089 322 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ANOS1P23352 680 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 GLRA1P23415 457 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 COX7A1P24310 79 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 SLC6A1P30531 599 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 GP2P55259 537 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 OR12D2P58182 307 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 RPL31P62899 125 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 FAM76BQ5HYJ3 339 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 TMEM200BQ69YZ2 307 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 KCTD18Q6PI47 426 aaPredicted RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 SLC16A9Q7RTY1 509 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 C16orf82Q7Z2V1 217 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 PQLC1Q8N2U9 271 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 FTMTQ8N4E7 242 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 CSNK2A3Q8NEV1 391 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 TMEM185AQ8NFB2 350 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 GNPDA2Q8TDQ7 276 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 CENPNQ96H22 339 aaPredicted RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 AKR1E2Q96JD6 320 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 NMNAT3Q96T66 252 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 FEVQ99581 238 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 KCNJ15Q99712 375 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 CIB1Q99828 191 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 NIPSNAP1Q9BPW8 284 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 KRCC1Q9NPI7 259 aaPredicted RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 OAZ3Q9UMX2 235 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 STARD9Q9P2P6 4700 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 HYDINQ4G0P3 5121 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 IGKV1D-17A0A075B6S4 117 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 FAM90A22PA8MWA6 464 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 G3V2T6 193 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 SOX14O95416 240 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 TFF1P04155 84 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 PSG2P11465 335 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 CFL1P23528 166 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 IFNGR2P38484 337 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 MYCNOSP40205 109 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 PRKXP51817 358 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ZNF770Q6IQ21 691 aaPredicted RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 ETV3LQ6ZN32 361 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 OR13D1Q8NGV5 346 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 RPL3LQ92901 407 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 SDSLQ96GA7 329 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ERMAPQ96PL5 475 aaPredicted RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 RTL8AQ9BWD3 113 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 EGLN3Q9H6Z9 239 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 SP140LQ9H930 580 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ABCB9Q9NP78 766 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 RPRD1BQ9NQG5 326 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 MRPL22Q9NWU5 206 aaKnown RBP9.24□□□□□ -0.93
RNF4-216ENST00000511859 N6AMT1Q9Y5N5 214 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 MPC1Q9Y5U8 109 aa9.24□□□□□ -0.93
RNF4-216ENST00000511859 ODF3BA8MYP8 253 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 ARPC3O15145 178 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 SLC2A1P11166 492 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 GSSP48637 474 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 DAPP51397 102 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 CAPZA1P52907 286 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 FXYD6P3P58550 94 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 TSPAN31Q12999 210 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 TAF13Q15543 124 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 TIGD6Q17RP2 521 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 LRRC36Q1X8D7 754 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 SMARCD3Q6STE5 483 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 ZDHHC13Q8IUH4 622 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 LINC00471Q8N535 108 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 OR11H6Q8NGC7 330 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 FANK1Q8TC84 345 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 SGK3Q96BR1 496 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 REEP6Q96HR9 211 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 ZNF649Q9BS31 505 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 COPS4Q9BT78 406 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 PAPOLGQ9BWT3 736 aaKnown RBP9.23□□□□□ -0.93
RNF4-216ENST00000511859 ZNF222Q9UK12 451 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 RHBDD3Q9Y3P4 386 aa9.23□□□□□ -0.93
RNF4-216ENST00000511859 DSCAML1Q8TD84 2053 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 C17orf98A8MV24 154 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 TBX1O43435 398 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 MITFO75030 526 aaPredicted RBP9.22□□□□□ -0.93
RNF4-216ENST00000511859 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
RNF4-216ENST00000511859 GSK3AP49840 483 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 LDLRAD2Q5SZI1 272 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 MINOS1Q5TGZ0 78 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 LPCAT4Q643R3 524 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 ZNF626Q68DY1 528 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 OR2T27Q8NH04 317 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 OR4K13Q8NH42 304 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 CAPSLQ8WWF8 208 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 DGCR6LQ9BY27 220 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 OR52D1Q9H346 318 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 PPP1R3EQ9H7J1 279 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 DCLRE1BQ9H816 532 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 ZNF556Q9HAH1 456 aa9.22□□□□□ -0.93
RNF4-216ENST00000511859 LIN7BQ9HAP6 207 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms