RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SUCNR1Q9BXA5 334 aa13.34□□□□□ -0.27
PDLIM5-216ENST00000511767 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-216ENST00000511767 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
PDLIM5-216ENST00000511767 NLKQ9UBE8 527 aa13.34□□□□□ -0.27
PDLIM5-216ENST00000511767 RPUSD1Q9UJJ7 312 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-216ENST00000511767 IGHV3OR16-10A0A075B7F0 116 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 SERPINA3P01011 423 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 HTR1AP08908 422 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 UBCP0CG48 685 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 PGA5P0DJD9 388 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 MPZP25189 248 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 FUT6P51993 359 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ARF6P62330 175 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ALKBH1Q13686 389 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 DGUOKQ16854 277 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNF691Q5VV52 312 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ACP7Q6ZNF0 438 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 C9orf139Q6ZV77 190 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 SYS1Q8N2H4 156 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 POC1AQ8NBT0 407 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ST8SIA4Q92187 359 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 FGGYQ96C11 551 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ADAT3Q96EY9 351 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 C4orf36Q96KX1 117 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNF48Q96MX3 618 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 WDFY2Q96P53 400 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 TBX15Q96SF7 602 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ALG8Q9BVK2 526 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 SIRPDQ9H106 197 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 INPP5EQ9NRR6 644 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNF222Q9UK12 451 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 SLC7A11Q9UPY5 501 aa13.33□□□□□ -0.28
PDLIM5-216ENST00000511767 IGKV1-27A0A075B6S5 117 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 E9PI62 339 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 J3QT63 122 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 CASQ2O14958 399 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 SIGLEC5O15389 551 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 SFTPBP07988 381 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 LIMS3P0CW19 117 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 LIMS4P0CW20 117 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 SELLP14151 372 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 PEX2P28328 305 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 ERVK11-1P61568 191 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 IKZF1Q13422 519 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 LRRC10Q5BKY1 277 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 DHRSXQ8N5I4 330 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 SIGLECL1Q8N7X8 197 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 SDSLQ96GA7 329 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 MYCBPQ99417 103 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 NRIP2Q9BQI9 281 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 PKIBQ9C010 78 aa13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 MS4A7Q9GZW8 240 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-216ENST00000511767 IGKV1-9A0A0C4DH69 117 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 CENPVL3A0A0U1RRI6 287 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 LOC107986453A0A1B0GWG9 222 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 FAM230AA0A1W2PPH8 454 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 RFPL4AA6NLU0 287 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 RFPL4AL1F8VTS6 287 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 TOX4O94842 621 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 PRDX2P32119 198 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 GABRA2P47869 451 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 BPIFB3P59826 476 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 ACTA2P62736 377 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 ACTG2P63267 376 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 IL13RA1P78552 427 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 OGFRL1Q5TC84 451 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 CD177Q8N6Q3 437 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 ZNRF1Q8ND25 227 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 OR10AC1Q8NH08 325 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 TRMT10AQ8TBZ6 339 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 FAM216AQ8WUB2 273 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 MRPL48Q96GC5 212 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 DCTN5Q9BTE1 182 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 JAM3Q9BX67 310 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 CHST5Q9GZS9 411 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
PDLIM5-216ENST00000511767 F8VVB4 439 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 F8VWA3 439 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 GATBO75879 557 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 DCKP27707 260 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 CAV3P56539 151 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 IL24Q13007 206 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 DNAAF1Q8NEP3 725 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 CNIH3Q8TBE1 160 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 PP6455Q8WZ26 134 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-216ENST00000511767 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms