RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RASSF5Q8WWW0 418 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 ARPC1AQ92747 370 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 DLX4Q92988 240 aaPredicted RBP8.3□□□□□ -1.08
SNF8-207ENST00000509995 RNF170Q96K19 258 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 COPS4Q9BT78 406 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 NDEL1Q9GZM8 345 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 GNB4Q9HAV0 340 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 ABCB9Q9NP78 766 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 RASL12Q9NYN1 266 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.3□□□□□ -1.08
SNF8-207ENST00000509995 B9D1Q9UPM9 204 aa8.3□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A18PA6NE21 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A16PA6NEW6 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A20PA6NIJ5 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A9PA6NNJ1 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ZNF850A8MQ14 1090 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A12PA8MX19 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A5PA8MXJ8 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 PSMD9O00233 223 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 TBX1O43435 398 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A15PP0C7V4 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A13PP0C7W8 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A14PP0C7W9 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 FAM90A24PP0C7X0 464 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 TROVE2P10155 538 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNF8-207ENST00000509995 PSMB8P28062 276 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 MNDAP41218 407 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 GPR4P46093 362 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 OR1E2P47887 323 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 GPM6AP51674 278 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 EDDM3BP56851 147 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ESRRGP62508 458 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 PRKCDQ05655 676 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 SNCBQ16143 134 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ZBED5Q49AG3 693 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 THNSL2Q86YJ6 484 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ZDHHC21Q8IVQ6 265 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ZDHHC23Q8IYP9 409 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ZNF596Q8TC21 504 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 TMED9Q9BVK6 235 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 NRIP3Q9NQ35 241 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 ACTR3BQ9P1U1 418 aa8.29□□□□□ -1.08
SNF8-207ENST00000509995 KLK5Q9Y337 293 aaPredicted RBP8.29□□□□□ -1.08
SNF8-207ENST00000509995 ARRDC5A6NEK1 342 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 K7N7A8 449 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 IGLV1-47P01700 117 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 HLA-DQA2P01906 255 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 TMEM11P17152 192 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 CFL1P23528 166 aaKnown RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 CASQ1P31415 396 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 CEACAM3P40198 252 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 RPS27P42677 84 aaKnown RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 SLURP1P55000 103 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 PRR20EP86478 221 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 PRR20CP86479 221 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 PRR20DP86480 221 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 PRR20BP86481 221 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 PRR20AP86496 221 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 ST3GAL3Q11203 375 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 EIF2B1Q14232 305 aaKnown RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 PAGE3Q5JUK9 113 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 ABHD12Q8N2K0 398 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 ZNF671Q8TAW3 534 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 SGK3Q96BR1 496 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 UBE2E2Q96LR5 201 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 GPX7Q96SL4 187 aaPredicted RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 KCNJ15Q99712 375 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 NRIP2Q9BQI9 281 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 OR51I2Q9H344 312 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 SRA1Q9HD15 236 aaKnown RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 MRPL22Q9NWU5 206 aaKnown RBP8.28□□□□□ -1.08
SNF8-207ENST00000509995 FAM53CQ9NYF3 392 aa8.28□□□□□ -1.08
SNF8-207ENST00000509995 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNF8-207ENST00000509995 OOSP1A8MZH6 123 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 RRP9O43818 475 aaKnown RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 MMP23AO75900 390 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 NDUFB2O95178 105 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 TXNDC12O95881 172 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 MEF2CQ06413 473 aaPredicted RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 HES1Q14469 280 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 GFOD2Q3B7J2 385 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 FAM53AQ6NSI3 398 aaPredicted RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 BAIAP2L2Q6UXY1 529 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 LINC00322Q6ZN03 302 aaPredicted RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 GDPD3Q7L5L3 318 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 RTN4RL2Q86UN3 420 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 PGAM4Q8N0Y7 254 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 ASCC1Q8N9N2 400 aaKnown RBP8.27□□□□□ -1.09
SNF8-207ENST00000509995 POC1AQ8NBT0 407 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 OR56B4Q8NH76 319 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 AQP3Q92482 292 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 CREB3L1Q96BA8 519 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 PRRC1Q96M27 445 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 OR5B12Q96R08 314 aa8.27□□□□□ -1.09
SNF8-207ENST00000509995 NSRP1Q9H0G5 558 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms