RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	GNB4	Q9HAV0	340 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	A4GNT	Q9UNA3	340 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900	RHBDD3	Q9Y3P4	386 aa		7.33	□□□□□ -1.24
PTPN20-223	ENST00000509900		M0QX08	132 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	AP4M1	O00189	453 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	CD14	P08571	375 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	VIM	P08670	466 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	SLC2A1	P11166	492 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	IFI30	P13284	250 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	SLC9A3	P48764	834 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	CENPA	P49450	140 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	SRSF3	P84103	164 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	CFHR3	Q02985	330 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	KRR1	Q13601	381 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	KLHL12	Q53G59	568 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	PTCHD4	Q6ZW05	846 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	TRMT10C	Q7L0Y3	403 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZNF575	Q86XF7	245 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZNF676	Q8N7Q3	588 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR13C2	Q8NGS9	318 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	ARPC1A	Q92747	370 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	APOPT1	Q96IL0	206 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	MICU1	Q9BPX6	476 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	TMED9	Q9BVK6	235 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	RTL8A	Q9BWD3	113 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	TMEM133	Q9H2Q1	129 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	NMNAT1	Q9HAN9	279 aa	Predicted RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	KRCC1	Q9NPI7	259 aa	Predicted RBP	7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	CYB5R1	Q9UHQ9	305 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	RIMS3	Q9UJD0	308 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	PYCARD	Q9ULZ3	195 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	CEPT1	Q9Y6K0	416 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	SESN1	Q9Y6P5	492 aa		7.32	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A18P	A6NE21	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A16P	A6NEW6	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A20P	A6NIJ5	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	TMEM210	A6NLX4	147 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A9P	A6NNJ1	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A12P	A8MX19	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A5P	A8MXJ8	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	SLC1A7	O00341	560 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	SDHD	O14521	159 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FGF16	O43320	207 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	MMP23A	O75900	390 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	DNAJC8	O75937	253 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	IGHG4	P01861	327 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	TK1	P04183	234 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A15P	P0C7V4	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A13P	P0C7W8	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A14P	P0C7W9	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM90A24P	P0C7X0	464 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAS	P25445	335 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	PSMB8	P28062	276 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	KIR3DL2	P43630	455 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	ARHGDIB	P52566	201 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	SLURP1	P55000	103 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	TAS2R41	P59536	307 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	RUNX1	Q01196	453 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	PIN1	Q13526	163 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	KIAA0141	Q14154	515 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	NANOGP8	Q6NSW7	305 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	DRAM2	Q6UX65	266 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	BAIAP2L2	Q6UXY1	529 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR9I1	Q8NGQ6	314 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	HPSE2	Q8WWQ2	592 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR5P3	Q8WZ94	311 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	SPTSSA	Q969W0	71 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZNF714	Q96N38	554 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR5B12	Q96R08	314 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR8B4	Q96RC9	309 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	GHITM	Q9H3K2	345 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	KLK5	Q9Y337	293 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	N6AMT1	Q9Y5N5	214 aa		7.31	□□□□□ -1.24
PTPN20-223	ENST00000509900	hCG_38984	A0A1B0GV85	526 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	SMIM23	A6NLE4	172 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	ANXA2P2	A6NMY6	339 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	NOTO	A8MTQ0	251 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	LEUTX	A8MZ59	168 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	XRCC2	O43543	280 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	IGLV1-51	P01701	117 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	SHBG	P04278	402 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	BPGM	P07738	259 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	SPARC	P09486	303 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR8U9	P0C7N5	309 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	GPX2	P18283	190 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	PRDX2	P32119	198 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	RPL14	P50914	215 aa	Known RBP	7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	ISL1	P61371	349 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	BDH1	Q02338	343 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	ANKDD1A	Q495B1	522 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	LRIF1	Q5T3J3	769 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	KCTD8	Q6ZWB6	473 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	OAF	Q86UD1	273 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	ZDHHC23	Q8IYP9	409 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	FAM156A	Q8NDB6	213 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	OR2AJ1	Q8NGZ0	328 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	TAMM41	Q96BW9	452 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	SORT1	Q99523	831 aa		7.3	□□□□□ -1.24
PTPN20-223	ENST00000509900	THAP7	Q9BT49	309 aa	Predicted RBP	7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms