RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ACP7Q6ZNF0 438 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 ASRGL1Q7L266 308 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 BCDIN3DQ7Z5W3 292 aaKnown RBP12.57□□□□□ -0.4
TPM3-219ENST00000509409 ZNF573Q86YE8 665 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 OR5K1Q8NHB7 308 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 FAM110DQ8TAY7 271 aaPredicted RBP12.57□□□□□ -0.4
TPM3-219ENST00000509409 SDSLQ96GA7 329 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 SSX3Q99909 188 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 HEXA-AS1Q9H8Q6 139 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 GPR173Q9NS66 373 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 NUFIP1Q9UHK0 495 aaKnown RBP12.57□□□□□ -0.4
TPM3-219ENST00000509409 ZNF222Q9UK12 451 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 POMPQ9Y244 141 aa12.57□□□□□ -0.4
TPM3-219ENST00000509409 SLC22A31A6NKX4 558 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 PRR32B1ATL7 298 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 MAGEB4O15481 346 aaPredicted RBP12.56□□□□□ -0.4
TPM3-219ENST00000509409 DNAJC8O75937 253 aaPredicted RBP12.56□□□□□ -0.4
TPM3-219ENST00000509409 NXPH2O95156 264 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 LGALS4P56470 323 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
TPM3-219ENST00000509409 EGR3Q06889 387 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
TPM3-219ENST00000509409 BCL2L15Q5TBC7 163 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 SLC35F2Q8IXU6 374 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 MKXQ8IYA7 352 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 BATF2Q8N1L9 274 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 CD177Q8N6Q3 437 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 TCEANCQ8N8B7 351 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 BEND2Q8NDZ0 799 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 C17orf50Q8WW18 174 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 RORBQ92753 470 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 KRT84Q9NSB2 600 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 OR14J1Q9UGF5 321 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 OR52A1Q9UKL2 312 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 R4GMQ9 66 aa12.56□□□□□ -0.4
TPM3-219ENST00000509409 hCG_1809904A0A1W2PP81 198 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 A0A1W2PPE2 198 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 A0A1W2PR64 198 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 A0A1W2PRV1 198 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 A6NIN4 97 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 J3QT63 122 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 M0R129 80 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 SYNGR1O43759 233 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 IGLV3-1P01715 115 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 TTRP02766 147 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 GABRA5P31644 462 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 HCP5Q6MZN7 132 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 FAHD1Q6P587 224 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 ZNF561Q8N587 486 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 BCAS4Q8TDM0 211 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 MNTQ99583 582 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 MOB1AQ9H8S9 216 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPM3-219ENST00000509409 POLDIP2Q9Y2S7 368 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 SNX5Q9Y5X3 404 aa12.55□□□□□ -0.4
TPM3-219ENST00000509409 DLGAP1O14490 977 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 MITFO75030 526 aaPredicted RBP12.54□□□□□ -0.4
TPM3-219ENST00000509409 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
TPM3-219ENST00000509409 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 COX7A1P24310 79 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 CEBPDP49716 269 aaPredicted RBP12.54□□□□□ -0.4
TPM3-219ENST00000509409 LRRC75BQ2VPJ9 315 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 TMEM200BQ69YZ2 307 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 PLEKHG7Q6ZR37 379 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 ELMOD2Q8IZ81 293 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 YIPF7Q8N8F6 280 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 TMEM163Q8TC26 289 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 UTP4Q969X6 686 aaKnown RBP12.54□□□□□ -0.4
TPM3-219ENST00000509409 SLC7A6OSQ96CW6 309 aaPredicted RBP12.54□□□□□ -0.4
TPM3-219ENST00000509409 IL4I1Q96RQ9 567 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 MEGF9Q9H1U4 602 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 CLN6Q9NWW5 311 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 SLC7A11Q9UPY5 501 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 V9GYS6 101 aa12.54□□□□□ -0.4
TPM3-219ENST00000509409 G3V2T6 193 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
TPM3-219ENST00000509409 TSPAN15O95858 294 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 CSF1P09603 554 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 PAX6P26367 422 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 ODF4Q2M2E3 257 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 C2orf68Q2NKX9 166 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 AADACL4Q5VUY2 407 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 NXNL2Q5VZ03 156 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 Q6ZTK2 550 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 ANGPTL5Q86XS5 388 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 OR14K1Q8NGZ2 314 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 TRMT10AQ8TBZ6 339 aaKnown RBP12.53□□□□□ -0.4
TPM3-219ENST00000509409 TBX5Q99593 518 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 RAB18Q9NP72 206 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 FBLN5Q9UBX5 448 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
TPM3-219ENST00000509409 SLC22A13Q9Y226 551 aa12.53□□□□□ -0.4
TPM3-219ENST00000509409 SIGLEC9Q9Y336 463 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms