RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 DMRTB1Q96MA1 342 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 GAFA1Q96PS6 74 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 SUCNR1Q9BXA5 334 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 NLKQ9UBE8 527 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 RPUSD1Q9UJJ7 312 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 IGHV3OR16-10A0A075B7F0 116 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 SERPINA3P01011 423 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 HTR1AP08908 422 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 UBCP0CG48 685 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 PGA5P0DJD9 388 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 MPZP25189 248 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 FUT6P51993 359 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ARF6P62330 175 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ALKBH1Q13686 389 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 DGUOKQ16854 277 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ZNF691Q5VV52 312 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ACP7Q6ZNF0 438 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 C9orf139Q6ZV77 190 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 SYS1Q8N2H4 156 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 POC1AQ8NBT0 407 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ST8SIA4Q92187 359 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 FGGYQ96C11 551 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ADAT3Q96EY9 351 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 C4orf36Q96KX1 117 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ZNF48Q96MX3 618 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 WDFY2Q96P53 400 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 TBX15Q96SF7 602 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ALG8Q9BVK2 526 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 SIRPDQ9H106 197 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 INPP5EQ9NRR6 644 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 ZNF222Q9UK12 451 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 SLC7A11Q9UPY5 501 aa13.33□□□□□ -0.28
PDLIM5-212ENST00000509333 IGKV1-27A0A075B6S5 117 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 E9PI62 339 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 J3QT63 122 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 CASQ2O14958 399 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 SIGLEC5O15389 551 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 SFTPBP07988 381 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 LIMS3P0CW19 117 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 LIMS4P0CW20 117 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 SELLP14151 372 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 PEX2P28328 305 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 ERVK11-1P61568 191 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 IKZF1Q13422 519 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 LRRC10Q5BKY1 277 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 DHRSXQ8N5I4 330 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 SIGLECL1Q8N7X8 197 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 SDSLQ96GA7 329 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 MYCBPQ99417 103 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 NRIP2Q9BQI9 281 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 PKIBQ9C010 78 aa13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 MS4A7Q9GZW8 240 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-212ENST00000509333 IGKV1-9A0A0C4DH69 117 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 CENPVL3A0A0U1RRI6 287 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 LOC107986453A0A1B0GWG9 222 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 FAM230AA0A1W2PPH8 454 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 RFPL4AA6NLU0 287 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 RFPL4AL1F8VTS6 287 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 TOX4O94842 621 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 PRDX2P32119 198 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 GABRA2P47869 451 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 BPIFB3P59826 476 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 ACTA2P62736 377 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 ACTG2P63267 376 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 IL13RA1P78552 427 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 OGFRL1Q5TC84 451 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 CD177Q8N6Q3 437 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 ZNRF1Q8ND25 227 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 OR10AC1Q8NH08 325 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 TRMT10AQ8TBZ6 339 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 FAM216AQ8WUB2 273 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 MRPL48Q96GC5 212 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 DCTN5Q9BTE1 182 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 JAM3Q9BX67 310 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 CHST5Q9GZS9 411 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
PDLIM5-212ENST00000509333 F8VVB4 439 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 F8VWA3 439 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 GATBO75879 557 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 DCKP27707 260 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 CAV3P56539 151 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 IL24Q13007 206 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 DNAAF1Q8NEP3 725 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 CNIH3Q8TBE1 160 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 PP6455Q8WZ26 134 aa13.3□□□□□ -0.28
PDLIM5-212ENST00000509333 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms