RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	IFNGR2	P38484	337 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	RFC3	P40938	356 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	EIF1	P41567	113 aa	Known RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	RBM34	P42696	430 aa	Known RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR1E2	P47887	323 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	DAP	P51397	102 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	P2RX1	P51575	399 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	CXCR4	P61073	352 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ESRRG	P62508	458 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	HPCA	P84074	193 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	H3F3A	P84243	136 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ST3GAL3	Q11203	375 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	NPRL3	Q12980	569 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC10A1	Q14973	349 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	PDK3	Q15120	406 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	TOMM34	Q15785	309 aa	Predicted RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	CHRFAM7A	Q494W8	412 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ACSF3	Q4G176	576 aa	Predicted RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	LIN52	Q52LA3	116 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	PDZK1	Q5T2W1	519 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	C6orf52	Q5T4I8	152 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	RIPPLY2	Q5TAB7	128 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	C1orf94	Q6P1W5	598 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	UGT2A3	Q6UWM9	527 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ARSK	Q6UWY0	536 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF836	Q6ZNA1	936 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	C17orf107	Q6ZR85	190 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OLIG3	Q7RTU3	272 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	GALNT10	Q86SR1	603 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	RANBP3L	Q86VV4	465 aa	Predicted RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OFCC1	Q8IZS5	231 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	TMEM99	Q8N816	258 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SMYD1	Q8NB12	490 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	KLHL30-AS1	Q8NEE0	82 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR6T1	Q8NGN1	323 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR1J4	Q8NGS1	313 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR5W2	Q8NH69	310 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	LILRB4	Q8NHJ6	448 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC7A13	Q8TCU3	470 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ADAMTS16	Q8TE57	1224 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	GIPC3	Q8TF64	312 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ITLN1	Q8WWA0	313 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	TRUB1	Q8WWH5	349 aa	Known RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF414	Q96IQ9	312 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	PRRC1	Q96M27	445 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	WFDC6	Q9BQY6	131 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	GABARAPL3	Q9BY60	117 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC19A3	Q9BZV2	496 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	DSN1	Q9H410	356 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	METTL7A	Q9H8H3	244 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	CALHM2	Q9HA72	323 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	C12orf10	Q9HB07	376 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	CACYBP	Q9HB71	228 aa	Known RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	FANCF	Q9NPI8	374 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SDHAF3	Q9NRP4	125 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	PNPLA3	Q9NST1	481 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	UBAP1	Q9NZ09	502 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	B4GALT7	Q9UBV7	327 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	TMCC3	Q9ULS5	477 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	NPIPA1	Q9UND3	350 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	MGAT4B	Q9UQ53	548 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	RNF6	Q9Y252	685 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF443	Q9Y2A4	671 aa	Predicted RBP	3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC35A3	Q9Y2D2	325 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF175	Q9Y473	711 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	OR10H1	Q9Y4A9	318 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	ORC6	Q9Y5N6	252 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	AP4B1	Q9Y6B7	739 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165		U3KQV3	271 aa		3.02	□□□□□ -1.93
NFKB1-208	ENST00000509165	IGKV1D-42	A0A075B6H8	117 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A087WUU8	490 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A0B4J2E0	115 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A0J9YW62	118 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		A0A1B0GX12	115 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TRAPPC13	A5PLN9	417 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TRIM64C	A6NLI5	447 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CLDN24	A6NM45	220 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165		H3BNH8	94 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	ZNF208	O43345	1280 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	MPZL2	O60487	215 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CDC40	O60508	579 aa	Known RBP eCLIP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	MRPS14	O60783	128 aa	Known RBP	3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TNFSF13	O75888	250 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	DIRAS1	O95057	198 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CCNB2	O95067	398 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CSTA	P01040	98 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	THY1	P04216	161 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CRH	P06850	196 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	LYN	P07948	512 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GNAO1	P09471	354 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	TSPAN19	P0C672	248 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	CCDC159	P0C7I6	412 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	PRG2	P13727	222 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GABRA1	P14867	456 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GDF1	P27539	372 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	HTR2A	P28223	471 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SLC6A8	P48029	635 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	GSS	P48637	474 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	P2RY4	P51582	365 aa		3.01	□□□□□ -1.93
NFKB1-208	ENST00000509165	SUCLG1	P53597	346 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms