RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 BEX5Q5H9J7 111 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 ABHD12BQ7Z5M8 362 aaPredicted RBP9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 SPAG16Q8N0X2 631 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 OR5AS1Q8N127 324 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM123Q8N131 208 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 OR2M7Q8NG81 312 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 C10orf35Q96D05 121 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 AQP10Q96PS8 301 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 NAA11Q9BSU3 229 aaPredicted RBP9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 RNF126Q9BV68 326 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 OR10A2Q9H208 303 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 MMP26Q9NRE1 261 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF629Q9UEG4 869 aaPredicted RBP9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 FLVCR1Q9Y5Y0 555 aa9.64□□□□□ -0.87
SH3RF1-203ENST00000508685 H7C2Y5 167 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 MFNGO00587 321 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 NDUFA2O43678 99 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 CXCL13O43927 109 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 HCKP08631 526 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 PRF1P14222 555 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 NTF4P34130 210 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 OR3A2P47893 321 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 GFRA1P56159 465 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 CARD18P57730 90 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 LSM6P62312 80 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 NKAPLQ5M9Q1 402 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ATRAIDQ6UW56 229 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 LHFPL1Q86WI0 220 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 COMMD2Q86X83 199 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 OR10D3Q8NH80 312 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 KCNE4Q8WWG9 221 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 EMG1Q92979 244 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 C2orf50Q96LR7 162 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 GPER1Q99527 375 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 C5orf66Q9H5L9 145 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF703Q9H7S9 590 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 GPR84Q9NQS5 396 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ASF1BQ9NVP2 202 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 MED19A0JLT2 244 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM166BA8MTA8 275 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SNAPINO95295 136 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SLC2A1P11166 492 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 AMY2BP19961 511 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF121P58317 390 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SRSF6Q13247 344 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ARFRP1Q13795 201 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 HYAL4Q2M3T9 481 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SLC22A6Q4U2R8 563 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 PLXDC2Q6UX71 529 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SULF2Q8IWU5 870 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 OR8B12Q8NGG6 310 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 SSC4DQ8WTU2 575 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF845Q96IR2 970 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 ADGRG7Q96K78 797 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 FAM173AQ9BQD7 235 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 FN3KRPQ9HA64 309 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 RYDENQ9NUL5 291 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 FOXD3Q9UJU5 478 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 BOKQ9UMX3 212 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 PRELID3BQ9Y3B1 194 aa9.63□□□□□ -0.87
SH3RF1-203ENST00000508685 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 CRTAPO75718 401 aaPredicted RBP9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 THBS4P35443 961 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 MAGEA5P43359 124 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 GFOD2Q3B7J2 385 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 PLAC9Q5JTB6 97 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 CLEC18BQ6UXF7 455 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 UNQ6126/PRO20091Q6UXV3 157 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 VASH2Q86V25 355 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 LRRC18Q8N456 261 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF283Q8N7M2 679 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 OR14K1Q8NGZ2 314 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 PP6455Q8WZ26 134 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM54Q969K7 222 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 NICN1Q9BSH3 213 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 RBM24Q9BX46 236 aaKnown RBP9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 SEC11CQ9BY50 192 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 CYTL1Q9NRR1 136 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 ABI3Q9P2A4 366 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 OSGIN2Q9Y236 505 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 MGAQ8IWI9 3026 aa9.62□□□□□ -0.87
SH3RF1-203ENST00000508685 A0A0A6YYD4 124 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 A0A0U1RQV5 110 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ARGFXA6NJG6 315 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ZNF716A6NP11 495 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 CDRT15L2A8MXV6 281 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 SOCS1O15524 211 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 PLATP00750 562 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 ABOP16442 354 aa9.61□□□□□ -0.87
SH3RF1-203ENST00000508685 TMEM50BP56557 158 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms