RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MADCAM1Q13477 382 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 LASP1Q14847 261 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 RAB35Q15286 201 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF791Q3KP31 576 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 TMEM176BQ3YBM2 270 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF805Q5CZA5 627 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 LY6G6FQ5SQ64 297 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 C9orf135Q5VTT2 229 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 FBXL22Q6P050 247 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC25A42Q86VD7 318 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 MAML2Q8IZL2 1156 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF619Q8N2I2 560 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 C10orf111Q8N326 155 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF664Q8N3J9 261 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 C10orf53Q8N6V4 93 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SIDT2Q8NBJ9 832 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC38A9Q8NBW4 561 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 BBS1Q8NFJ9 593 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC26A10Q8NG04 563 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR51S1Q8NGJ8 323 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR4C16Q8NGL9 310 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR1N1Q8NGS0 311 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR13C4Q8NGS5 318 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR2L2Q8NH16 312 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SYNPRQ8TBG9 265 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 CD300LFQ8TDQ1 290 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 APOBEC4Q8WW27 367 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 TMEM106AQ96A25 262 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 MOAP1Q96BY2 351 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 MS4A6EQ96DS6 147 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 RBMXL1Q96E39 390 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 NEURL3Q96EH8 262 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 TVP23CQ96ET8 276 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 CPNE2Q96FN4 548 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 PGLYRP2Q96PD5 576 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR1F2PQ96R84 312 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 GAL3ST4Q96RP7 486 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 IMMP2LQ96T52 175 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 VPS25Q9BRG1 176 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 EIF5A2Q9GZV4 153 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF700Q9H0M5 742 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 OR51I1Q9H343 314 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 PRO1933Q9H354 126 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 ADGRL4Q9HBW9 690 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 PDE7BQ9NP56 450 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 RAB18Q9NP72 206 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 SOHLH2Q9NX45 425 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 AHSPQ9NZD4 102 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 RHCGQ9UBD6 479 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 P2RX2Q9UBL9 471 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 FRYQ5TBA9 3013 aa3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 TP53BP1Q12888 1972 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-211ENST00000508531 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 PIGBOS1A0A0B4J2F0 54 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 IGHV4-28A0A0C4DH34 117 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 A0A1B0GV72 72 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 TMEM235A6NFC5 223 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 NPIPB13A6NJU9 1138 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 GJE1A6NN92 205 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 NPIPB5A8MRT5 1133 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM166BA8MTA8 275 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF705GA8MUZ8 300 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 NPIPB4C9JG80 1138 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 FTCDNL1E5RQL4 147 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM72CH0Y354 149 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CLDN34H7C241 214 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 DCTN6O00399 190 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CCSO14618 274 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CDIPTO14735 213 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 HBP1O60381 514 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF354AO60765 605 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 GCM2O75603 506 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 TNFSF15O95150 251 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 LRATO95237 230 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 TNFRSF6BO95407 300 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CLDN7O95471 211 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 IGLV2-11P01706 119 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 OPN1SWP03999 348 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 RPN2P04844 631 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CSN2P05814 226 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 OR2T7P0C7T2 308 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF286BP0CG31 522 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 MPC1LP0DKB6 136 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CD37P11049 281 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 LAMP1P11279 417 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 ACP5P13686 325 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 PGAM2P15259 253 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 SRMP19623 302 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 MMP11P24347 488 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 CDK2P24941 298 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 DPP4P27487 766 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 OR1E1P30953 314 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 GNRHRP30968 328 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 DCTDP32321 178 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 TAGLN2P37802 199 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 GLIPR1P48060 266 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 ARRB1P49407 418 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 RND2P52198 227 aa3.97□□□□□ -1.77
PDLIM5-211ENST00000508531 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms