RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 KCNS2Q9ULS6 477 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 BAIAP2Q9UQB8 552 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PPP1R3CQ9UQK1 317 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 LOC105371242A0A075B767 164 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TMEM272A0A1B0GTI8 110 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 ARRDC5A6NEK1 342 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 RNF212BA8MTL3 300 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 IQCF6A8MYZ5 107 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 B4DSR2 109 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TRAPPC2LH3BP13 241 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 H3BSA7 217 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 PHF1O43189 567 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 CIB2O75838 187 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 IFNA2P01563 188 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 IGHV2-70P01814 119 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 IGHV2-5P01817 119 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 MSMBP08118 114 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 CD55P08174 381 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 H2BFMP0C1H6 154 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 FAM157CP0CG43 387 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 SRD5A1P18405 259 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 ADRA2CP18825 462 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 PAICSP22234 425 aaKnown RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 TUBG1P23258 451 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 FASP25445 335 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 OPRL1P41146 370 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 RGS6P49758 472 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 P2RX3P56373 397 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 GMFBP60983 142 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 SEC61A1P61619 476 aaKnown RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 ELF3P78545 371 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 OR8G1Q15617 311 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 PCK2Q16822 640 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 KRTAP21-3Q3LHN1 58 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 DMRTC1Q5HYR2 192 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 PRAMEF6Q5VXH4 476 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 DRAM2Q6UX65 266 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 LYPD2Q6UXB3 125 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 LRRN1Q6UXK5 716 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 ZNF826PQ6ZT77 177 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 CCDC121Q6ZUS5 278 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 LRRC28Q86X40 367 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 RNF133Q8WVZ7 376 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TMEM186Q96B77 213 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 NRBF2Q96F24 287 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TIMD4Q96H15 378 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 PGAM5Q96HS1 289 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 GAL3ST1Q99999 423 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 APOL4Q9BPW4 351 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 SLC25A32Q9H2D1 315 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 RIBC2Q9H4K1 309 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 METTL17Q9H7H0 456 aaPredicted RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 TMEM165Q9HC07 324 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 MMP26Q9NRE1 261 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 TUBG2Q9NRH3 451 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 DDX28Q9NUL7 540 aaKnown RBP3.78□□□□□ -1.8
NUP54-206ENST00000508465 TMEM160Q9NX00 188 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 IL19Q9UHD0 177 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 RHBDD3Q9Y3P4 386 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 NPTNQ9Y639 398 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 DYSFO75923 2080 aa3.78□□□□□ -1.8
NUP54-206ENST00000508465 COL6A5A8TX70 2615 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 ATRQ13535 2644 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 IGHV3OR15-7A0A075B7D8 119 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 CCDC182A6NF36 153 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 A6NIN4 97 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 PRR32B1ATL7 298 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 ZNF878C9JN71 531 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 ANKRD65E5RJM6 399 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 F5H0A9 414 aaPredicted RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 H3BSH0 61 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 RRP9O43818 475 aaKnown RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 BAG2O95816 211 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 TFF1P04155 84 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 WNT2P09544 360 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 ALOX5APP20292 161 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 HNF1AP20823 631 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 SLC2A5P22732 501 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 HSD11B1P28845 292 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 OTX1P32242 354 aaPredicted RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 CD80P33681 288 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 SLC15A1P46059 708 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 SRP9P49458 86 aaKnown RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 CCR9P51686 369 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 BLVRAP53004 296 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 DVL1P1P54792 670 aaPredicted RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 BTG1P62324 171 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 ESRRGP62508 458 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 GRB2P62993 217 aaKnown RBP3.77□□□□□ -1.81
NUP54-206ENST00000508465 EFNB1P98172 346 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 FAM3AP98173 230 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 SLC3A1Q07837 685 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 MAB21L1Q13394 359 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 GK3PQ14409 553 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 KDM4DQ6B0I6 523 aa3.77□□□□□ -1.81
NUP54-206ENST00000508465 PLEKHG7Q6ZR37 379 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms