RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 HS3ST1O14792 307 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 PDGFBP01127 241 aaPredicted RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 ZNF441Q8N8Z8 693 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 OR13G1Q8NGZ3 307 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 RDH5Q92781 318 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 CER1O95813 267 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 ZNF133P52736 654 aaPredicted RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 NFAM1Q8NET5 270 aaPredicted RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 OR1F12Q8NHA8 337 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 CYYR1Q96J86 154 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 OR10C1Q96KK4 312 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 PLA2G3Q9NZ20 509 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 DIDO1Q9BTC0 2240 aaKnown RBP11.3□□□□□ -0.6
SMG7-214ENST00000508461 A0A1B0GTI1 187 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 HSD17B6O14756 317 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 TMEM50BP56557 158 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 PDZK1IP1Q13113 114 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 CPT1CQ8TCG5 803 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 BCO1Q9HAY6 547 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
SMG7-214ENST00000508461 IGHMP01871 453 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 TK1P04183 234 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 CD74P04233 296 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 ZNF14P17017 642 aaPredicted RBP11.29□□□□□ -0.6
SMG7-214ENST00000508461 HAAOP46952 286 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 ANKRD55Q3KP44 614 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
SMG7-214ENST00000508461 RHOFQ9HBH0 211 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 FBXO7Q9Y3I1 522 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 MSGN1A6NI15 193 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 TMEM14DPA8MWL7 114 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 HLA-HP01893 362 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 OR5AC1P0C628 307 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 PCBD1P61457 104 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 OR51H1Q8NH63 302 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 DNASE2BQ8WZ79 361 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
SMG7-214ENST00000508461 TGIF2Q9GZN2 237 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 MUC22E2RYF6 1773 aaPredicted RBP11.29□□□□□ -0.6
SMG7-214ENST00000508461 CACNA1HO95180 2353 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 TRAPPC2LH3BP13 241 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 HPP00738 406 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
SMG7-214ENST00000508461 CBR1P16152 277 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 PEA15Q15121 130 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 TMEM268Q5VZI3 342 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 GGNBP1Q5YKI7 109 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 PTX4Q96A99 478 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 SLX1AQ9BQ83 275 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 TIMM10BQ9Y5J6 103 aa11.29□□□□□ -0.6
SMG7-214ENST00000508461 PUS1Q9Y606 427 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMG7-214ENST00000508461 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 A6NLC8 198 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 GP1BAP07359 652 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 SPATA46Q5T0L3 261 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 OSR2Q8N2R0 312 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 OR14K1Q8NGZ2 314 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 PIK3IP1Q96FE7 263 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 RAB18Q9NP72 206 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 MCTS1Q9ULC4 181 aaKnown RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 TOX3O15405 576 aaPredicted RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 OR13C7P0DN81 318 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 RAC1P63000 192 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 CSRP2Q16527 193 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 PRSS54Q6PEW0 395 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 ZSCAN4Q8NAM6 433 aaPredicted RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 OR10Z1Q8NGY1 313 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 CHRNA10Q9GZZ6 450 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 FBXL17Q9UF56 701 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 BOKQ9UMX3 212 aaPredicted RBP11.28□□□□□ -0.6
SMG7-214ENST00000508461 GPR132Q9UNW8 380 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 HS3ST3B1Q9Y662 390 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 H3BP45 60 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 ATG12O94817 140 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 LIFP15018 202 aa11.28□□□□□ -0.6
SMG7-214ENST00000508461 FKBP2P26885 142 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms