RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
DDR1-262ENST00000508312 OPN3Q9H1Y3 402 aaPredicted RBP11.21□□□□□ -0.61
DDR1-262ENST00000508312 BANF2Q9H503 90 aa11.21□□□□□ -0.61
DDR1-262ENST00000508312 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDR1-262ENST00000508312 CENPMQ9NSP4 180 aa11.21□□□□□ -0.61
DDR1-262ENST00000508312 EHFQ9NZC4 300 aa11.21□□□□□ -0.61
DDR1-262ENST00000508312 LIPGQ9Y5X9 500 aa11.21□□□□□ -0.61
DDR1-262ENST00000508312 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.62
DDR1-262ENST00000508312 TMEM269A0A1B0GVZ9 245 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 SHISA7A6NL88 538 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 H0YIG0 161 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 SYT7O43581 403 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 IFNA21P01568 189 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 TMEM156Q8N614 296 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 OR5R1Q8NH85 324 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.62
DDR1-262ENST00000508312 HSF4Q9ULV5 492 aa11.21□□□□□ -0.62
DDR1-262ENST00000508312 RAB4AP20338 218 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 TUBG1P23258 451 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 CSNK2A1P68400 391 aaPredicted RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 NKAIN1Q4KMZ8 207 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 KCTD18Q6PI47 426 aaPredicted RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 C5orf24Q7Z6I8 188 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 LINC00346Q8IVM7 164 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 CYB561D1Q8N8Q1 229 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 CSNK2A3Q8NEV1 391 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 KLHDC7BQ96G42 594 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 GPR87Q9BY21 358 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 SHISA8B8ZZ34 492 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 VSIG8P0DPA2 414 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 MAS1LP35410 378 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 LINC00114Q6XXX2 140 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 COMMD2Q86X83 199 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 TAAR8Q969N4 342 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 RTBDNQ9BSG5 229 aaPredicted RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 C14orf166Q9Y224 244 aaKnown RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 LDLRAD4O15165 306 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 NPSP0C0P6 89 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 OR5H8P0DN80 308 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 GPR3P46089 330 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 RPS4XP62701 263 aaKnown RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 HSD11B2P80365 405 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 EGR4Q05215 589 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
DDR1-262ENST00000508312 ZNF74Q16587 644 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
DDR1-262ENST00000508312 SCDO00767 359 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 DEDDO75618 318 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 SEC11BP0C7V7 166 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 PGA3P0DJD8 388 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 GNG10P50151 68 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 BATFQ16520 125 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 SGPP2Q8IWX5 399 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 DTWD2Q8NBA8 298 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 MRPL24Q96A35 216 aaKnown RBP11.19□□□□□ -0.62
DDR1-262ENST00000508312 FAM131CQ96AQ9 280 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 WFDC1Q9HC57 220 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 C1orf123Q9NWV4 160 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 LOC101059948A0A1B0GTJ6 334 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 M0R143 59 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 SOCS1O15524 211 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 TBPP20226 339 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 FPR2P25090 351 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 RABIFP47224 123 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 RPL29P47914 159 aaKnown RBP11.19□□□□□ -0.62
DDR1-262ENST00000508312 OR1D5P58170 312 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 GPR137CQ8N3F9 429 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 OR13G1Q8NGZ3 307 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 ABHD14AQ9BUJ0 271 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 FOXQ1Q9C009 403 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 HIF3AQ9Y2N7 669 aa11.19□□□□□ -0.62
DDR1-262ENST00000508312 PHF3Q92576 2039 aaKnown RBP11.19□□□□□ -0.62
DDR1-262ENST00000508312 NCOR1O75376 2440 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 ZNF878C9JN71 531 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 RPL36A-HNRNPH2H7BZ11 118 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 MASP2O00187 686 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 DFFBO76075 338 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 IL11P20809 199 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 CFPP27918 469 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 ALDH3B1P43353 468 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 RND3P61587 244 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 SP6Q3SY56 376 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 ZNF880Q6PDB4 577 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 REEP6Q96HR9 211 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 MMP25Q9NPA2 562 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 MMP17Q9ULZ9 603 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 TLCD2A6NGC4 264 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 TNFRSF10CO14798 259 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 ZNF264O43296 627 aa11.18□□□□□ -0.62
DDR1-262ENST00000508312 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms