RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MCM3APO60318 1980 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 PLXNA3P51805 1871 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 C1orf226A1L170 272 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 H0YIZ8 118 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 PNMTP11086 282 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 CD99P14209 185 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 DUSP1P28562 367 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 PCBP3P57721 371 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 TPPP2P59282 170 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 P2RY6Q15077 328 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 LTC4SQ16873 150 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 CDO1Q16878 200 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 ACSM3Q53FZ2 586 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 RPL7L1Q6DKI1 246 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 NUDT8Q8WV74 236 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 PSMF1Q92530 271 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 ORAI3Q9BRQ5 295 aa9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 AK6Q9Y3D8 172 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 SIRT4Q9Y6E7 314 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-210ENST00000508216 MYO10Q9HD67 2058 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM213A2RRL7 107 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ARL5CA6NH57 179 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC38A8A6NNN8 435 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 KLF4O43474 513 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 HLA-AP01891 365 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 MPC1LP0DKB6 136 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 PLP1P60201 277 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ACVR1Q04771 509 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TCEA2Q15560 299 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 CEACAM21Q3KPI0 293 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 CD300EQ496F6 205 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ALG10Q5BKT4 473 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 PHF19Q5T6S3 580 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF776Q68DI1 518 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM42Q69YG0 159 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 MEPCEQ7L2J0 689 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 OR1B1Q8NGR6 318 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 DOK4Q8TEW6 326 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 PTPMT1Q8WUK0 201 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 SARAFQ96BY9 339 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ZMYND19Q96E35 227 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 OR10C1Q96KK4 312 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF681Q96N22 645 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TIMP4Q99727 224 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TM7SF3Q9NS93 570 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF581Q9P0T4 197 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 MRPS33Q9Y291 106 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 HCFC2Q9Y5Z7 792 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 SCN8AQ9UQD0 1980 aa9.53□□□□□ -0.88
PDLIM5-210ENST00000508216 TRBV4-1A0A0J9YWV2 114 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 A0A1W2PR80 420 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 SSC5DA1L4H1 1573 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 CDC14CA4D256 554 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 MSGN1A6NI15 193 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 TGFAP01135 160 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 FURINP09958 794 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 ERGP11308 486 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 NID1P14543 1247 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 CDK2P24941 298 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 ARF3P61204 181 aaPredicted RBP9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 BTN3A2P78410 334 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 ARF1P84077 181 aaKnown RBP9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 HSD52Q0P140 79 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 HIST3H3Q16695 136 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF585BQ52M93 769 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 SPSB3Q6PJ21 355 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 LGI3Q8N145 548 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 OR10S1Q8NGN2 331 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 NANOS1Q8WY41 292 aaKnown RBP9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 FAM46BQ96A09 425 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 SEC22AQ96IW7 307 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 Q9N2K0 584 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 PPIAL4AQ9Y536 164 aa9.52□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM150BA6NC51 233 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 SIVA1O15304 175 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 RAMP2O60895 175 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 DKK1O94907 266 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 SOX14O95416 240 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 REG1AP05451 166 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 FAM87AP0C7U9 286 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 TNFSF9P41273 254 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 GYG1P46976 350 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 ID4P47928 161 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 THBS3P49746 956 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 SUMO1P63165 101 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 LCN2P80188 198 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 GAGE5Q13069 117 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 GAGE6Q13070 117 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 IL15RAQ13261 267 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 ACKR1Q16570 336 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms