RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DEFA5Q01523 94 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 SLC9A3R2Q15599 337 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 TAF9Q16594 264 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 ACOT7LQ6ZUV0 252 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 SEMA6DQ8NFY4 1073 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 KCNE4Q8WWG9 221 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 HAS2Q92819 552 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 S100A13Q99584 98 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 URM1Q9BTM9 101 aaKnown RBP12.62□□□□□ -0.39
DDX41-208ENST00000507955 SLC6A15Q9H2J7 730 aa12.62□□□□□ -0.39
DDX41-208ENST00000507955 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
DDX41-208ENST00000507955 AMY2BP19961 511 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 MPZP25189 248 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 THBS4P35443 961 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 RRADP55042 308 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 SNU13P55769 128 aaKnown RBP12.61□□□□□ -0.39
DDX41-208ENST00000507955 SLC16A14Q7RTX9 510 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 HOGA1Q86XE5 327 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 AIFM2Q9BRQ8 373 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 PECRQ9BY49 303 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 CNOT1A5YKK6 2376 aaKnown RBP12.61□□□□□ -0.39
DDX41-208ENST00000507955 FAM221AA4D161 298 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 MSTNO14793 375 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 TSPAN9O75954 239 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
DDX41-208ENST00000507955 GLRA1P23415 457 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 ZNF92Q03936 586 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 ZDHHC22Q8N966 263 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 BHLHE23Q8NDY6 225 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 CPEB3Q8NE35 698 aaKnown RBP12.61□□□□□ -0.39
DDX41-208ENST00000507955 OR2M7Q8NG81 312 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 OR1S2Q8NGQ3 325 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 OR13G1Q8NGZ3 307 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 DNTTIP1Q9H147 329 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 CALHM2Q9HA72 323 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
DDX41-208ENST00000507955 ADAP1O75689 374 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 AKR1C2P52895 323 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 AKR1C1Q04828 323 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 SNTB1Q13884 538 aaKnown RBP12.6□□□□□ -0.39
DDX41-208ENST00000507955 RAB35Q15286 201 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 TUSC5Q8IXB3 177 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 FAM89BQ8N5H3 189 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 PHB2Q99623 299 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 PCDHB10Q9UN67 800 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 GSK3AP49840 483 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 TGIF1Q15583 401 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 OR1C1Q15619 314 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 PAN3Q58A45 887 aaKnown RBP12.6□□□□□ -0.39
DDX41-208ENST00000507955 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 ABHD17BQ5VST6 288 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 ABLIM2Q6H8Q1 611 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 FNDC9Q8TBE3 224 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 INTS12Q96CB8 462 aaKnown RBP12.6□□□□□ -0.39
DDX41-208ENST00000507955 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
DDX41-208ENST00000507955 C5orf51A6NDU8 294 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 FOXI3A8MTJ6 420 aaPredicted RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 F5H0A9 414 aaPredicted RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 MTRF1O75570 445 aaKnown RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 CPT1CQ8TCG5 803 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 WNT2BQ93097 391 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 RRNAD1Q96FB5 475 aaKnown RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 NARS2Q96I59 477 aaKnown RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 EHFQ9NZC4 300 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 ZNF503-AS2A6NEH8 195 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 DHRS7CA6NNS2 312 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 H0YIZ8 118 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 SCGNO76038 276 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 CST2P09228 141 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 PGAM2P15259 253 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 OPRM1P35372 400 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 SERPINF1P36955 418 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 OR3A2P47893 321 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 PIGYQ3MUY2 71 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 DRAM2Q6UX65 266 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 OCSTAMPQ9BR26 566 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 ZNF703Q9H7S9 590 aaPredicted RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 PLEKHJ1Q9NW61 149 aa12.59□□□□□ -0.39
DDX41-208ENST00000507955 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
DDX41-208ENST00000507955 IGKV1-12A0A0C4DH73 117 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 OR6C6A6NF89 314 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 C3orf80F5H4A9 247 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.39
DDX41-208ENST00000507955 MT-CO3P00414 261 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 KNG1P01042 644 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 IGKV1D-12P01611 117 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms