RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
SNF8-205ENST00000507302 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
SNF8-205ENST00000507302 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
SNF8-205ENST00000507302 TENM2Q9NT68 2774 aa13.13□□□□□ -0.31
SNF8-205ENST00000507302 A0A0U1RQV5 110 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 C3orf84H3BNL1 204 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 K7N7A8 449 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 GASTP01350 101 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 FABP3P05413 133 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 H2BFMP0C1H6 154 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 ZNF728P0DKX0 622 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 IGHV1-8P0DP01 117 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 GSTT1P30711 240 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 MAP2K3P46734 347 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 TRPM8Q7Z2W7 1104 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
SNF8-205ENST00000507302 NRIP2Q9BQI9 281 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 NIPAL2Q9H841 368 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 LIN7BQ9HAP6 207 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 SPAG4Q9NPE6 437 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 U3KQK5 164 aa13.12□□□□□ -0.31
SNF8-205ENST00000507302 ACOD1A6NK06 481 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 ZNF737O75373 536 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 ATP6V1B1P15313 513 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 NUDT2P50583 147 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.311e-7■□□□□ 10.6
SNF8-205ENST00000507302 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 NKAPLQ5M9Q1 402 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 HAGHLQ6PII5 290 aaPredicted RBP13.11□□□□□ -0.31
SNF8-205ENST00000507302 TCF23Q7RTU1 214 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 CENPVQ7Z7K6 275 aaPredicted RBP13.11□□□□□ -0.31
SNF8-205ENST00000507302 MRPL41Q8IXM3 137 aaKnown RBP13.11□□□□□ -0.31
SNF8-205ENST00000507302 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 V9GYQ6 96 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 SACSQ9NZJ4 4579 aa13.11□□□□□ -0.31
SNF8-205ENST00000507302 CLIC3O95833 236 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 AMY1AP04745 511 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 AMY2AP04746 511 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 LYNP07948 512 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 HSD17B1P14061 328 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 MPZP25189 248 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 CEBPDP49716 269 aaPredicted RBP13.1□□□□□ -0.31
SNF8-205ENST00000507302 OR12D2P58182 307 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
SNF8-205ENST00000507302 LCN1P1Q5VSP4 162 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 ZNF454Q8N9F8 522 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 OR4X2Q8NGF9 303 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 C1orf21Q9H246 121 aa13.1□□□□□ -0.31
SNF8-205ENST00000507302 EPPK1P58107 5090 aaKnown RBP13.1□□□□□ -0.31
SNF8-205ENST00000507302 J3QT63 122 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 IFNGP01579 166 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 ZNF3P17036 446 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 C10orf99Q6UWK7 81 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 RNF144BQ7Z419 303 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.09□□□□□ -0.31
SNF8-205ENST00000507302 RNF148Q8N7C7 305 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 DPF1Q92782 380 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 LYSTQ99698 3801 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 MCRIP2Q9BUT9 160 aaKnown RBP13.09□□□□□ -0.31
SNF8-205ENST00000507302 DGCR6LQ9BY27 220 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 MED20Q9H944 212 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 MAGEL2Q9UJ55 1249 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
SNF8-205ENST00000507302 DNAH1Q9P2D7 4330 aa13.09□□□□□ -0.31
SNF8-205ENST00000507302 FAM183AA6NL82 134 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 RIIAD1A6NNX1 92 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 CCDC22O60826 627 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 GMNNO75496 209 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 ZFPL1O95159 310 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 MAGEA2P43356 314 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 THBS3P49746 956 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 MEF2CQ06413 473 aaPredicted RBP13.08□□□□□ -0.32
SNF8-205ENST00000507302 DMRTC1Q5HYR2 192 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 SAMD4BQ5PRF9 694 aaKnown RBP13.08□□□□□ -0.32
SNF8-205ENST00000507302 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 ARMC1Q9NVT9 282 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 HILPDAQ9Y5L2 63 aa13.08□□□□□ -0.32
SNF8-205ENST00000507302 HUWE1Q7Z6Z7 4374 aaKnown RBP13.07□□□□□ -0.32
SNF8-205ENST00000507302 IGHV2-26A0A0B4J1V2 119 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 PQLC2LA1A4F0 135 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 H0YHG0 523 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 H3BUI4 141 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
SNF8-205ENST00000507302 ALOX5APP20292 161 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 ACTA2P62736 377 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 ACTG2P63267 376 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 ACTC1P68032 377 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 ACTA1P68133 377 aa13.07□□□□□ -0.32
SNF8-205ENST00000507302 SLC34A1Q06495 639 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms