RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 IKZF2Q9UKS7 526 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 GTF2A1LQ9UNN4 478 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 SIGLEC9Q9Y336 463 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 J3QT63 122 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 DHRS3O75911 302 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 NRASP01111 189 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 HOXB6P17509 224 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 COX7A1P24310 79 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 PAX6P26367 422 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 EFNB2P52799 333 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 CRISP1P54107 249 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 FLOT2Q14254 428 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 HERPUD1Q15011 391 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF684Q5T5D7 378 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 PPP1R35Q8TAP8 253 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 ASB17Q8WXJ9 295 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 CNN2Q99439 309 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 FAM234AQ9H0X4 552 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 GPR173Q9NS66 373 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 TMEM14AQ9Y6G1 99 aa9.39□□□□□ -0.91
HMGCS1-204ENST00000507293 TGP01266 2768 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 TCRBV3S1A0A5B6 114 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 LOC110117498-PIK3R3F6TDL0 507 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 M0R129 80 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 SLC1A7O00341 560 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 MAGEB4O15481 346 aaPredicted RBP9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 PRKYO43930 277 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 SRSF10O75494 262 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 PGA5P0DJD9 388 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 CCL3L1P16619 93 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 PRDX2P32119 198 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 HAAOP46952 286 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 BMXP51813 675 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 ESRRGP62508 458 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 RPL31P62899 125 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 BCL2L15Q5TBC7 163 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 FAHD1Q6P587 224 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 PLEKHG7Q6ZR37 379 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 Q6ZTK2 550 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 BCDIN3DQ7Z5W3 292 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 DNAJC9Q8WXX5 260 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 APOL4Q9BPW4 351 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 NRIP2Q9BQI9 281 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 MOB1AQ9H8S9 216 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 USE1Q9NZ43 259 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 FOXJ3Q9UPW0 622 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 POLDIP2Q9Y2S7 368 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 PLXNB1O43157 2135 aa9.38□□□□□ -0.91
HMGCS1-204ENST00000507293 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 PQLC2LA1A4F0 135 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 CHST1O43916 411 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 NXPH2O95156 264 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 KIR2DS4P43632 304 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 DAPP51397 102 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 CXCR4P61073 352 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF273Q14593 569 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 PTGES3Q15185 160 aaKnown RBP9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 AANATQ16613 207 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 DNAL1Q4LDG9 190 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 CLVS2Q5SYC1 327 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 TMEM42Q69YG0 159 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 CRIP3Q6Q6R5 217 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF322Q6U7Q0 402 aaPredicted RBP9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF782Q6ZMW2 699 aaPredicted RBP9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ASRGL1Q7L266 308 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 MEPCEQ7L2J0 689 aaKnown RBP9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF573Q86YE8 665 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 SLC35F2Q8IXU6 374 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 C11orf42Q8N5U0 333 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 OR2T27Q8NH04 317 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 OR2T6Q8NHC8 308 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 NRBF2Q96F24 287 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 PRRG3Q9BZD7 231 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 RANBP3Q9H6Z4 567 aaPredicted RBP9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 HEXA-AS1Q9H8Q6 139 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 ADGRL4Q9HBW9 690 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 RAB18Q9NP72 206 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 OR52A1Q9UKL2 312 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 R4GMQ9 66 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 V9GYS6 101 aa9.37□□□□□ -0.91
HMGCS1-204ENST00000507293 A0A1B0GTI1 187 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 hCG_1809904A0A1W2PP81 198 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 A0A1W2PPE2 198 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 A0A1W2PR64 198 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 A0A1W2PRV1 198 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms