RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 REG4Q9BYZ8 158 aa10.78□□□□□ -0.68
TCOF1-210ENST00000506767 TMEM165Q9HC07 324 aa10.78□□□□□ -0.68
TCOF1-210ENST00000506767 VCX3AQ9NNX9 186 aa10.78□□□□□ -0.68
TCOF1-210ENST00000506767 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
TCOF1-210ENST00000506767 CKLFQ9UBR5 152 aa10.78□□□□□ -0.68
TCOF1-210ENST00000506767 PPIAL4EA0A075B759 164 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PPIAL4DF5H284 164 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 TNFRSF13BO14836 293 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-210ENST00000506767 WNT9BO14905 357 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 HCKP08631 526 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 OCMP0CE72 109 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PGA5P0DJD9 388 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PPIAL4FP0DN26 164 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 CD37P11049 281 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 SRMP19623 302 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 ZP1P60852 638 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 ERVK11-1P61568 191 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PPP3R1P63098 170 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 LOXL1Q08397 574 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PDZK1IP1Q13113 114 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 AVPI1Q5T686 147 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 TEX36Q5VZQ5 186 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 POC1AQ8NBT0 407 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 SPACA5Q96QH8 159 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 MRPS26Q9BYN8 205 aaKnown RBP10.77□□□□□ -0.69
TCOF1-210ENST00000506767 MTCH1Q9NZJ7 389 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.69
TCOF1-210ENST00000506767 LGALS8O00214 317 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 MAGEB3O15480 346 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 AKR7A2O43488 359 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 ARL6IP5O75915 188 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 ZNF205O95201 554 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 ADRA2CP18825 462 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-210ENST00000506767 FGF9P31371 208 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-210ENST00000506767 MDH2P40926 338 aaKnown RBP10.76□□□□□ -0.69
TCOF1-210ENST00000506767 ZNF404Q494X3 552 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 HSD17B12Q53GQ0 312 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 SLC25A26Q70HW3 274 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 LRRTM1Q86UE6 522 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 CDH26Q8IXH8 852 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 SAXO1Q8IYX7 474 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 CIARTQ8N365 385 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-210ENST00000506767 CLDND2Q8NHS1 167 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 YIPF6Q96EC8 236 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 NRIP2Q9BQI9 281 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 HES4Q9HCC6 221 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 TCF7L1Q9HCS4 588 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 RASL12Q9NYN1 266 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 STUB1Q9UNE7 303 aa10.76□□□□□ -0.69
TCOF1-210ENST00000506767 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-210ENST00000506767 CR1P17927 2039 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 IGKV1-12A0A0C4DH73 117 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 MEGF11A6BM72 1044 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 OOEPA6NGQ2 149 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 IGKV1D-12P01611 117 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 MAS1P04201 325 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 TFAP2AP05549 437 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 MUC1P15941 1255 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 CD36P16671 472 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 GLRA1P23415 457 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 CD80P33681 288 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 ZNF93P35789 620 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 LMO4P61968 165 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 SFRP4Q6FHJ7 346 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 MKXQ8IYA7 352 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 MUC20Q8N307 709 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 BOLLQ8N9W6 283 aaKnown RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 ZSCAN4Q8NAM6 433 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 C19orf18Q8NEA5 215 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 PXT1Q8NFP0 134 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 OR13F1Q8NGS4 319 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 RFT1Q96AA3 541 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 C12orf43Q96C57 262 aaKnown RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 SEH1LQ96EE3 360 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 CPNE2Q96FN4 548 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 COX4I2Q96KJ9 171 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 ZNF488Q96MN9 340 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 TMEM246Q9BRR3 403 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 WDR13Q9H1Z4 485 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 OR51E2Q9H255 320 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 TXNL4BQ9NX01 149 aaKnown RBP10.75□□□□□ -0.69
TCOF1-210ENST00000506767 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
TCOF1-210ENST00000506767 YLPM1P49750 1951 aaKnown RBP10.74□□□□□ -0.69
TCOF1-210ENST00000506767 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 SHISA3A0PJX4 238 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 F8VVB4 439 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 F8VWA3 439 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 H7C1Q1 480 aa10.74□□□□□ -0.69
TCOF1-210ENST00000506767 SPRY1O43609 319 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms