RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ISL1P61371 349 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ACTA2P62736 377 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ACTG2P63267 376 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF91Q05481 1191 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 TUSC1Q2TAM9 212 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 POC1AQ8NBT0 407 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
CLDND1-211ENST00000506575 NPRL2Q8WTW4 380 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 GATAD2BQ8WXI9 593 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 LGALS12Q96DT0 336 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF48Q96MX3 618 aaPredicted RBP12.87□□□□□ -0.35
CLDND1-211ENST00000506575 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 DCTN5Q9BTE1 182 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 SIRPDQ9H106 197 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 FAM118AQ9NWS6 357 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
CLDND1-211ENST00000506575 KPTNQ9Y664 436 aa12.87□□□□□ -0.35
CLDND1-211ENST00000506575 IGKV1D-17A0A075B6S4 117 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 J3QLW9 94 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 SYNGR1O43759 233 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 NXPH2O95156 264 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 FADS2O95864 444 aaKnown RBP12.86□□□□□ -0.35
CLDND1-211ENST00000506575 PGA5P0DJD9 388 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 DBTP11182 482 aaKnown RBP12.86□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF19P17023 458 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 GABRB1P18505 474 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 KIR3DL2P43630 455 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 CAPZA1P52907 286 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 OR12D2P58182 307 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 DGUOKQ16854 277 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 TMEM244Q5VVB8 128 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 TMEM185AQ8NFB2 350 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 OR2G2Q8NGZ5 317 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 LHX4Q969G2 390 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 C10orf35Q96D05 121 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 DMRTB1Q96MA1 342 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
CLDND1-211ENST00000506575 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
CLDND1-211ENST00000506575 SOX21Q9Y651 276 aaPredicted RBP12.86□□□□□ -0.35
CLDND1-211ENST00000506575 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 SLC1A7O00341 560 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 NOS1APO75052 506 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF20P17024 532 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 FUT6P51993 359 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 CAV3P56539 151 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 CNN3Q15417 329 aaKnown RBP12.85□□□□□ -0.35
CLDND1-211ENST00000506575 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 RUSC1-AS1Q66K80 236 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 VMO1Q7Z5L0 202 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 ANGPTL5Q86XS5 388 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 RDH10Q8IZV5 341 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 KIR3DL3Q8N743 410 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 ZNRF1Q8ND25 227 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 PP6455Q8WZ26 134 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 BORCS8Q96FH0 119 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 AMBNQ9NP70 447 aa12.85□□□□□ -0.35
CLDND1-211ENST00000506575 RPL36Q9Y3U8 105 aaKnown RBP12.85□□□□□ -0.35
CLDND1-211ENST00000506575 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 MDFIC2A0A1B0GVS7 189 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 RFPL4AA6NLU0 287 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 RFPL4AL1F8VTS6 287 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 MPZP25189 248 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 RAB40BQ12829 278 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 IL24Q13007 206 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 GALEQ14376 348 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 KLHL22Q53GT1 634 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 CALHM1Q8IU99 346 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 C8orf46Q8TAG6 207 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 PELI1Q96FA3 418 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 SDSLQ96GA7 329 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 NRIP2Q9BQI9 281 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 PKIBQ9C010 78 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 FRRS1LQ9P0K9 344 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 ZNF222Q9UK12 451 aa12.84□□□□□ -0.35
CLDND1-211ENST00000506575 CLDN34H7C241 214 aa12.83□□□□□ -0.36
CLDND1-211ENST00000506575 ISG15P05161 165 aa12.83□□□□□ -0.36
CLDND1-211ENST00000506575 RNASE1P07998 156 aaKnown RBP12.83□□□□□ -0.36
CLDND1-211ENST00000506575 OCM2P0CE71 109 aa12.83□□□□□ -0.36
CLDND1-211ENST00000506575 OCMP0CE72 109 aaPredicted RBP12.83□□□□□ -0.36
CLDND1-211ENST00000506575 PRDX2P32119 198 aa12.83□□□□□ -0.36
CLDND1-211ENST00000506575 COMPP49747 757 aaPredicted RBP12.83□□□□□ -0.36
CLDND1-211ENST00000506575 CCR9P51686 369 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms