RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 RNLSQ5VYX0 342 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF773Q6PK81 442 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TMPRSS11AQ6ZMR5 421 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 BCDIN3DQ7Z5W3 292 aaKnown RBP8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 OR8B12Q8NGG6 310 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF671Q8TAW3 534 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TBC1D15Q8TC07 691 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 HAVCR2Q8TDQ0 301 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 LGALS12Q96DT0 336 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 MED30Q96HR3 178 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TLNRD1Q9H1K6 362 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 MOB1AQ9H8S9 216 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 SMURF1Q9HCE7 757 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ACOXLQ9NUZ1 547 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 FKBP14Q9NWM8 211 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF319Q9P2F9 582 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 RPUSD1Q9UJJ7 312 aaKnown RBP8.63□□□□□ -1.03
NR1I3-222ENST00000506018 DIMT1Q9UNQ2 313 aaKnown RBP8.63□□□□□ -1.03
NR1I3-222ENST00000506018 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
NR1I3-222ENST00000506018 OR5B21A6NL26 309 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 J3QL48 77 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 MYL12BO14950 172 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 SPRY1O43609 319 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 SFTPBP07988 381 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 MRPL3P09001 348 aaKnown RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 EGR1P18146 543 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 GLRA1P23415 457 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 ARF6P62330 175 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 GNG3P63215 75 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 HOXA4Q00056 320 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 RIPPLY1Q0D2K3 151 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 CDONQ4KMG0 1287 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 ZBTB37Q5TC79 503 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 LAIR2Q6ISS4 152 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 KCTD20Q7Z5Y7 419 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 WDR86Q86TI4 376 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 C11orf53Q8IXP5 236 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 SLC35F2Q8IXU6 374 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF679Q8IYX0 411 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 OR10H4Q8NGA5 316 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 OR52I1Q8NGK6 324 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 SSMEM1Q8WWF3 244 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 FCGR1BQ92637 280 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 LHX4Q969G2 390 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 C1orf147Q96MC9 270 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 CCL13Q99616 98 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 JAM3Q9BX67 310 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 CDCA4Q9BXL8 241 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 MRPS26Q9BYN8 205 aaKnown RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 PRDM13Q9H4Q3 707 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 UNKLQ9H9P5 680 aaKnown RBP8.62□□□□□ -1.03
NR1I3-222ENST00000506018 ADGRL4Q9HBW9 690 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 GTF2A1LQ9UNN4 478 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 POMT1Q9Y6A1 747 aa8.62□□□□□ -1.03
NR1I3-222ENST00000506018 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 IGHV1-69P01742 117 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 IGHA1P01876 353 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 MMP9P14780 707 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 ACKR3P25106 362 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 GPM6AP51674 278 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 GMFBP60983 142 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 ROM1Q03395 351 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 EGR3Q06889 387 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 IKZF1Q13422 519 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 BLMHQ13867 455 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 CEACAM21Q3KPI0 293 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 FAM76BQ5HYJ3 339 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 ATPAF1Q5TC12 328 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 Q6YL49 198 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 KIR3DL3Q8N743 410 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 OR5A2Q8NGI9 324 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 OR4F5Q8NH21 305 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 NPRL2Q8WTW4 380 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 H1FXQ92522 213 aaKnown RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 RPL3LQ92901 407 aaKnown RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 TMIGD2Q96BF3 282 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 OR8B4Q96RC9 309 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 MND1Q9BWT6 205 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 PBOV1Q9GZY1 135 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 SLC25A10Q9UBX3 287 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-222ENST00000506018 ENPP5Q9UJA9 477 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 KLHDC2Q9Y2U9 406 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 FAM96BQ9Y3D0 163 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 MDFIC2A0A1B0GVS7 189 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 ZNF732B4DXR9 585 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 LOC110117498-PIK3R3F6TDL0 507 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 PSMD9O00233 223 aa8.61□□□□□ -1.03
NR1I3-222ENST00000506018 AKR7A2O43488 359 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms