RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 MPPED1O15442 326 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 DNPH1O43598 174 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 C1QBP02746 253 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 FAM27BQ5VT28 67 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF519Q8TB69 540 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-207ENST00000504761 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF426Q9BUY5 554 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 CHST6Q9GZX3 395 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 TINAGQ9UJW2 476 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
TCOF1-207ENST00000504761 LHFPL6Q9Y693 200 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 CD59P13987 128 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 KLK2P20151 261 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 S100A11P31949 105 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 TREM2Q9NZC2 230 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 PIN1P1O15428 100 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 GFRA3O60609 400 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF169Q14929 603 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-207ENST00000504761 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
TCOF1-207ENST00000504761 SSX9Q7RTT3 188 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 SHISA3A0PJX4 238 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 H7C1Q1 480 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 CLDN1O95832 211 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 ADRB1P08588 477 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 PARP12Q9H0J9 701 aaKnown RBP12.36□□□□□ -0.43
TCOF1-207ENST00000504761 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 GLAP06280 429 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 PLA2G7Q13093 441 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 MSMO1Q15800 293 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 ST3GAL2Q16842 350 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 MDP1Q86V88 176 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 OR8U1Q8NH10 309 aa12.36□□□□□ -0.43
TCOF1-207ENST00000504761 OR5H14A6NHG9 310 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-207ENST00000504761 SLC25A47Q6Q0C1 308 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 TMEM200AQ86VY9 491 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 FAM58AQ8N1B3 248 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 SUCNR1Q9BXA5 334 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF391Q9UJN7 358 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 TMEM200CA6NKL6 621 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 CDIPTO14735 213 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 NDUFB6O95139 128 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 IFNA4P05014 189 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 ADRA2AP08913 450 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF362Q5T0B9 420 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-207ENST00000504761 TMEM268Q5VZI3 342 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 WDR89Q96FK6 387 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-207ENST00000504761 MSL2Q9HCI7 577 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 MSTNO14793 375 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 GEMIN2O14893 280 aaKnown RBP12.35□□□□□ -0.43
TCOF1-207ENST00000504761 ZIC3O60481 467 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 GZMKP49863 264 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 CMTM3Q96MX0 182 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 GPR27Q9NS67 375 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 STARD10Q9Y365 291 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 CSAG2Q9Y5P2 127 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 PPP3CBP16298 524 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
TCOF1-207ENST00000504761 HAS2Q92819 552 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 NMNAT2Q9BZQ4 307 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 KIF25Q9UIL4 384 aa12.35□□□□□ -0.43
TCOF1-207ENST00000504761 A0A0D9SG52 128 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 NKX6-3A6NJ46 265 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 ADAM10O14672 748 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 TERTO14746 1132 aaKnown RBP12.34□□□□□ -0.43
TCOF1-207ENST00000504761 NUPL2O15504 423 aaKnown RBP12.34□□□□□ -0.43
TCOF1-207ENST00000504761 GABRA1P14867 456 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 NME2P22392 152 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 MST1P26927 711 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 RFPL4BQ6ZWI9 263 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 OR13G1Q8NGZ3 307 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 PLEKHF2Q9H8W4 249 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 TMEM127O75204 238 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-207ENST00000504761 ROM1Q03395 351 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 ZBTB44Q8NCP5 570 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms