RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 HCP5Q6MZN7 132 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 LDLRAD3Q86YD5 345 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 GID4Q8IVV7 300 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 TMEM86BQ8N661 226 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 KIR3DL3Q8N743 410 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 LHX4Q969G2 390 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 FAM71F1Q96KD3 344 aaPredicted RBP11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 PRRG3Q9BZD7 231 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 CHIAQ9BZP6 476 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 MOB1AQ9H8S9 216 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 UNKLQ9H9P5 680 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 NLKQ9UBE8 527 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 SLC22A13Q9Y226 551 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 PIGLQ9Y2B2 252 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 MMP24Q9Y5R2 645 aa11.49□□□□□ -0.57
PDLIM7-211ENST00000504318 A0A0U1RQK1 487 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 A0A1W2PQL4 384 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 OR5B21A6NL26 309 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 OR2AT4A6NND4 320 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 DHRS7CA6NNS2 312 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 RNASEK-C17orf49H0YIS7 233 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 J3QRE1 110 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 SYNGR1O43759 233 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 MTRF1O75570 445 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 MPZP25189 248 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 HTR1FP30939 366 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 GTF2A1P52655 376 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 GMFBP60983 142 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 IKZF1Q13422 519 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 RBM48Q5RL73 367 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 OR51G2Q8NGK0 314 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 GATAD2BQ8WXI9 593 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 SDSLQ96GA7 329 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 AJUBAQ96IF1 538 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 ACOXLQ9NUZ1 547 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 WARS2Q9UGM6 360 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 IKZF2Q9UKS7 526 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 GMPPBQ9Y5P6 360 aa11.48□□□□□ -0.57
PDLIM7-211ENST00000504318 A0A1B0GVI7 797 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 FAM181BA6NEQ2 426 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 LOC110117498-PIK3R3F6TDL0 507 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 NDUFB3O43676 98 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 NOS1APO75052 506 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 PGA5P0DJD9 388 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 IER3P46695 156 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ERVK11-1P61568 191 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 IL13RA1P78552 427 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ZNF85Q03923 595 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 PRR31Q5SQ13 230 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 HAGHLQ6PII5 290 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ACP7Q6ZNF0 438 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 KCTD8Q6ZWB6 473 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 MOB3CQ70IA8 216 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 CD177Q8N6Q3 437 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ZNRF1Q8ND25 227 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 TSPAN14Q8NG11 270 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 FAM81AQ8TBF8 368 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 RORBQ92753 470 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 UBE2FQ969M7 185 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 TMIGD2Q96BF3 282 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 HRASLS5Q96KN8 279 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 C1RLQ9NZP8 487 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 DNAJB11Q9UBS4 358 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 ENPP5Q9UJA9 477 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
PDLIM7-211ENST00000504318 IGKV1-27A0A075B6S5 117 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 A0A087WXM4 84 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 ZNF670-ZNF695F2Z2N8 137 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 APOL3O95236 402 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 CLIC3O95833 236 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 NRASP01111 189 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 OR2T7P0C7T2 308 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 SMIM18P0DKX4 95 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 GLRA1P23415 457 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 KLRD1Q13241 179 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 LRRC10Q5BKY1 277 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 PLCXD3Q63HM9 321 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 CALHM1Q8IU99 346 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 PRSS35Q8N3Z0 413 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 OR8J1Q8NGP2 316 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 OR2T27Q8NH04 317 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 NRIP2Q9BQI9 281 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 GPR173Q9NS66 373 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
PDLIM7-211ENST00000504318 MEGF11A6BM72 1044 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms