RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
SNF8-203ENST00000504000 MESP1Q9BRJ9 268 aa13.1□□□□□ -0.31
SNF8-203ENST00000504000 SUCNR1Q9BXA5 334 aa13.1□□□□□ -0.31
SNF8-203ENST00000504000 ZNF701Q9NV72 531 aaPredicted RBP13.1□□□□□ -0.31
SNF8-203ENST00000504000 RALGAPA1Q6GYQ0 2036 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 TP53I11O14683 189 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 MT-ND4LP03901 98 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 PTAFRP25105 342 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 C6orf201Q7Z4U5 140 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 RASL10BQ96S79 203 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 GINS3Q9BRX5 216 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 ANGPTL4Q9BY76 406 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 NECAP2Q9NVZ3 263 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 PIGLQ9Y2B2 252 aa13.09□□□□□ -0.31
SNF8-203ENST00000504000 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 C9JQL5 133 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 PRSS44E7EML9 344 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 F5H5K5 113 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 H7C1Q1 480 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 M0R135 149 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 S100A8P05109 93 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 OR5H8P0DN80 308 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 FAHP16930 419 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 LMO1P25800 156 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SNCAP37840 140 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 KCNJ3P48549 501 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 MAFIPQ8WZ33 124 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 ZNF799Q96GE5 643 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 CYYR1Q96J86 154 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 TAAR9Q96RI9 348 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SPSB2Q99619 263 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 METTL9Q9H1A3 318 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 DHHO43323 396 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 GPR137BO60478 399 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SCRG1O75711 98 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 TSPAN15O95858 294 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 OR8U9P0C7N5 309 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SFTPDP35247 375 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 P2RY1P47900 373 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 AFF3P51826 1226 aaKnown RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 UCP3P55916 312 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 HGFACQ04756 655 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 HABP2Q14520 560 aaPredicted RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 IL13RA2Q14627 380 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 TMEM187Q14656 261 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 SHBQ15464 509 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 GALNTL5Q7Z4T8 443 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 ZNF561Q8N587 486 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 OR8U1Q8NH10 309 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 DEFB126Q9BYW3 111 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 LUZP4Q9P127 313 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 MTCH2Q9Y6C9 303 aa13.08□□□□□ -0.32
SNF8-203ENST00000504000 CHCHD2Q9Y6H1 151 aaPredicted RBP13.08□□□□□ -0.32
SNF8-203ENST00000504000 A0A1B0GW64 132 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 C1orf196B1AJZ1 125 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 OPN1LWP04000 364 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 GLAP06280 429 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 CD63P08962 238 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 PIGPP57054 158 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 ZNF574Q6ZN55 896 aaPredicted RBP13.07□□□□□ -0.32
SNF8-203ENST00000504000 NTNG2Q96CW9 530 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 FOXD3Q9UJU5 478 aaPredicted RBP13.07□□□□□ -0.32
SNF8-203ENST00000504000 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
SNF8-203ENST00000504000 UBE2CO00762 179 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 TERTO14746 1132 aaKnown RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 SMIM6P0DI80 62 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 ZNF728P0DKX0 622 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 AGAP20933 346 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 MTCP1P56278 107 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 CNN3Q15417 329 aaKnown RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 SMAD2Q15796 467 aaKnown RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 FAM219AQ8IW50 185 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 FOXRED2Q8IWF2 684 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 NPRL2Q8WTW4 380 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 AKR1E2Q96JD6 320 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 C18orf12Q96KH6 178 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 OR6C1Q96RD1 312 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 SYT3Q9BQG1 590 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 NAA11Q9BSU3 229 aaPredicted RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 CRB3Q9BUF7 120 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 ZNF391Q9UJN7 358 aa13.06□□□□□ -0.32
SNF8-203ENST00000504000 FBXO9Q9UK97 447 aaPredicted RBP13.06□□□□□ -0.32
SNF8-203ENST00000504000 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms