RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IDNKQ5T6J7 187 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 CROCCP3Q8IVE0 287 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 OR51F2Q8NH61 342 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 SLC25A28Q96A46 364 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 PKIBQ9C010 78 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 FN3KRPQ9HA64 309 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 C1orf123Q9NWV4 160 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 TREM2Q9NZC2 230 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 PPP1R3CQ9UQK1 317 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 MRPS28Q9Y2Q9 187 aaKnown RBP17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 HECTD1Q9ULT8 2610 aa17.24■□□□□ 0.35
CDC42SE2-206ENST00000503291 J3QT63 122 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 CFPP27918 469 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 RBMXP38159 391 aaKnown RBP17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 PMELP40967 661 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 IL24Q13007 206 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 RAB11BQ15907 218 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 NEU4Q8WWR8 484 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 ERGIC1Q969X5 290 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 STEAP1Q9UHE8 339 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 ING4Q9UNL4 249 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 AWAT2Q6E213 333 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 GLIPR1L1Q6UWM5 242 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 WDR82Q6UXN9 313 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 MKXQ8IYA7 352 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZSCAN4Q8NAM6 433 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 CXorf56Q9H5V9 222 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 MTCH1Q9NZJ7 389 aa17.23■□□□□ 0.35
CDC42SE2-206ENST00000503291 ABCA12Q86UK0 2595 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 A0A0B4J203 849 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 IGKV1-12A0A0C4DH73 117 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 CDC14BO60729 498 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 NDUFS7O75251 213 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 CYB5AP00167 134 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 IGKV1D-12P01611 117 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 SOX6P35712 828 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 P2RY14Q15391 338 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 TGIF2LYQ8IUE0 185 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 PXT1Q8NFP0 134 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 OR51D1Q8NGF3 324 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZNF671Q8TAW3 534 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 SLAMF9Q96A28 289 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 S100A13Q99584 98 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 LIN7BQ9HAP6 207 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 ELL3Q9HB65 397 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 POLDIP2Q9Y2S7 368 aa17.22■□□□□ 0.35
CDC42SE2-206ENST00000503291 hCG_1807616A0A1W2PRN6 198 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 LY6HO94772 140 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 ASCL4Q6XD76 172 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 CACNG2Q9Y698 323 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 DYSFO75923 2080 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 APCP25054 2843 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 IGHV1-69-2A0A0G2JMI3 117 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 C2orf76Q3KRA6 126 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 SAXO1Q8IYX7 474 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 CCL17Q92583 94 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 FAM3DQ96BQ1 224 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 C1orf147Q96MC9 270 aaPredicted RBP17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 ZNF488Q96MN9 340 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 SMURF1Q9HCE7 757 aa17.21■□□□□ 0.35
CDC42SE2-206ENST00000503291 NBPF19A0A087WUL8 3843 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 AKR7A2O43488 359 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 PAHP00439 452 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 ARSBP15848 533 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 CFHR2P36980 270 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 NPBWR2P48146 333 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 CNPY1Q3B7I2 92 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 SLC22A6Q4U2R8 563 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 BATF2Q8N1L9 274 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 TBC1D15Q8TC07 691 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 Q8TCH9 128 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 CCDC59Q9P031 241 aaKnown RBP17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 PLEKHA6Q9Y2H5 1048 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 F12P00748 615 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 SFTPBP07988 381 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 COL8A2P25067 703 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 HOXA4Q00056 320 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 RSU1Q15404 277 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 OR10K1Q8NGX5 313 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 LRRC29Q8WV35 223 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 SLIRPQ9GZT3 109 aaKnown RBP17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 METTL9Q9H1A3 318 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 GHRLQ9UBU3 117 aa17.2■□□□□ 0.34
CDC42SE2-206ENST00000503291 C3orf80F5H4A9 247 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 F8VVB4 439 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 F8VWA3 439 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 LYNX1G3V0Z9 82 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 TRAPPC2LH3BP13 241 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 TMEM127O75204 238 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 ACAA1P09110 424 aaPredicted RBP17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 PGA5P0DJD9 388 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 LYNX1P0DP58 116 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 SNRPBP14678 240 aaKnown RBP17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 EFNA4P52798 201 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 DGUOKQ16854 277 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 OR11L1Q8NGX0 322 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 CEP19Q96LK0 163 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 KCNK15Q9H427 330 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 DCAF16Q9NXF7 216 aa17.19■□□□□ 0.34
CDC42SE2-206ENST00000503291 RNF7Q9UBF6 113 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms