RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.94□□□□□ -1.62
LSM3P4-201ENST00000502948 ARL2BPQ9Y2Y0 163 aa4.94□□□□□ -1.62
LSM3P4-201ENST00000502948 MINOS1-NBL1R4GNA1 71 aa4.94□□□□□ -1.62
LSM3P4-201ENST00000502948 V9GYQ6 96 aa4.94□□□□□ -1.62
LSM3P4-201ENST00000502948 V9GYS6 101 aa4.94□□□□□ -1.62
LSM3P4-201ENST00000502948 TMEM269A0A1B0GVZ9 245 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PQLC2LA1A4F0 135 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 A6NDX4 124 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM183AA6NL82 134 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 RFPL4AA6NLU0 287 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 AQP12BA6NM10 295 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ADARB2-AS1A8MUL3 147 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM90A22PA8MWA6 464 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 RFPL4AL1F8VTS6 287 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 H3BN98 237 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 J3QT63 122 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 GSC2O15499 205 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ANGPTL7O43827 346 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 CHST1O43916 411 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 FBXO24O75426 580 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 SRSF10O75494 262 aaKnown RBP4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ALX3O95076 343 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 SOX14O95416 240 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 NRASP01111 189 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 CCL1P22362 96 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 POU1F1P28069 291 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PRDX2P32119 198 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 GABRA2P47869 451 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ACTR3P61158 418 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 CD83Q01151 205 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 IL24Q13007 206 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM189A2Q15884 450 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF829Q3KNS6 432 aaPredicted RBP4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF684Q5T5D7 378 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 TMEM200BQ69YZ2 307 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PLBD1Q6P4A8 553 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 HAGHLQ6PII5 290 aaPredicted RBP4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 KCTD8Q6ZWB6 473 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 KRT77Q7Z794 578 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 AQP12AQ8IXF9 295 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 MKXQ8IYA7 352 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PNKDQ8N490 385 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 CD177Q8N6Q3 437 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 TMEM185AQ8NFB2 350 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 RPS4Y2Q8TD47 263 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 THEM6Q8WUY1 208 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 C17orf50Q8WW18 174 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 C10orf35Q96D05 121 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 NRBF2Q96F24 287 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 OR8B4Q96RC9 309 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 TEAD3Q99594 435 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 NRIP2Q9BQI9 281 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PRSS22Q9GZN4 317 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 PBOV1Q9GZY1 135 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 DNAJC27Q9NZQ0 273 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 LAMP5Q9UJQ1 280 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 FOXJ3Q9UPW0 622 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 N6AMT1Q9Y5N5 214 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 U3KQV3 271 aa4.93□□□□□ -1.62
LSM3P4-201ENST00000502948 SELENOFO60613 162 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF737O75373 536 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CST1P01037 141 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 TTRP02766 147 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CHRM2P08172 466 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF728P0DKX0 622 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 IGHV1-8P0DP01 117 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CALB2P22676 271 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ERP29P30040 261 aaKnown RBP4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 SLC6A1P30531 599 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 HAAOP46952 286 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 RIDAP52758 137 aaKnown RBP4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 DLX1P56177 255 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 EFNB1P98172 346 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 MS4A2Q01362 244 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 IL18R1Q13478 541 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 DCTN2Q13561 401 aaKnown RBP4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 GINS1Q14691 196 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CLVS2Q5SYC1 327 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CYP2R1Q6VVX0 501 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CPOQ8IVL8 374 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 Q8IYB0 196 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ENTHD1Q8IYW4 607 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ELMOD2Q8IZ81 293 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM185AQ8N0U4 392 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 OR2T27Q8NH04 317 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM81AQ8TBF8 368 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 RORBQ92753 470 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 AKR1E2Q96JD6 320 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 OCSTAMPQ9BR26 566 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 CHID1Q9BWS9 393 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 PRRG3Q9BZD7 231 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 OR51V1Q9H2C8 321 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 YY1AP1Q9H869 796 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 MED20Q9H944 212 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF556Q9HAH1 456 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 LIN7BQ9HAP6 207 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 RHOFQ9HBH0 211 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms