RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 OSGIN2Q9Y236 505 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 MEMO1Q9Y316 297 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 CACNA1BQ00975 2339 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 MAP1BP46821 2468 aaKnown RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 ZNF816-ZNF321PA0A0X1KG74 233 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 SPAARA0A1B0GVQ0 90 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 C5orf63A6NC05 138 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 KRBOX1C9JBD0 128 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 NRASP01111 189 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 CRHP06850 196 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ANOS1P23352 680 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 PSMB6P28072 239 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 NPY4RP50391 375 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ARPC4P59998 168 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 PSG4Q00888 419 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 AIMP2Q13155 320 aaKnown RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 SFRP5Q5T4F7 317 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 RGS7BPQ6MZT1 257 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 CRIP3Q6Q6R5 217 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ALKAL2Q6UX46 152 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 OVCH2Q7RTZ1 564 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 C1QL2Q7Z5L3 287 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ADAD2Q8NCV1 583 aaKnown RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 ZNF837Q96EG3 531 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 VRK1Q99986 396 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 ST6GALNAC5Q9BVH7 336 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 WNT5BQ9H1J7 359 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 FN3KRPQ9HA64 309 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 CHMP1AQ9HD42 196 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 SDHAF2Q9NX18 166 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 WASF3Q9UPY6 502 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 hCG_38984A0A1B0GV85 526 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 MFSD2BA6NFX1 497 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 ZNF587BE7ETH6 402 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 MASP2O00187 686 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 CCSO14618 274 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 NEURL1O76050 574 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 SPDEFO95238 335 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 COX5BP10606 129 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 PMELP40967 661 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 OR8B8Q15620 311 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 CCDC157Q569K6 752 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.43□□□□□ -0.74
NUP54-202ENST00000502850 HSD17B13Q7Z5P4 300 aaPredicted RBP10.43□□□□□ -0.74
NUP54-202ENST00000502850 OR13G1Q8NGZ3 307 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 C17orf50Q8WW18 174 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 FER1L6-AS2Q96M78 137 aa10.43□□□□□ -0.74
NUP54-202ENST00000502850 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
NUP54-202ENST00000502850 ZNF230Q9UIE0 474 aaPredicted RBP10.43□□□□□ -0.74
NUP54-202ENST00000502850 TRBV6-7A0A0A0MS04 114 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 FAM230AA0A1W2PPH8 454 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 ZNF724A8MTY0 619 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 HTR3BO95264 441 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 MT-CO3P00414 261 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 MMP7P09237 267 aaPredicted RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 SPINK2P20155 84 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 GABRR1P24046 479 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 ACKR3P25106 362 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 SERPINF1P36955 418 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 STARP49675 285 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 LHX2P50458 406 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 OR1C1Q15619 314 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 DCAF10Q5QP82 559 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 DPPA2Q7Z7J5 298 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 EIF4E3Q8N5X7 224 aaKnown RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 ZSCAN4Q8NAM6 433 aaPredicted RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 OR10K1Q8NGX5 313 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 OR2AE1Q8NHA4 323 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 AKR7LQ8NHP1 331 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 ABHD3Q8WU67 409 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 SPSB4Q96A44 273 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 ZNF775Q96BV0 537 aaPredicted RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 SEC22AQ96IW7 307 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 ARPC5LQ9BPX5 153 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 SCNM1Q9BWG6 230 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 C1QTNF5Q9BXJ0 243 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 DNTTIP1Q9H147 329 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 BCO1Q9HAY6 547 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 C1orf123Q9NWV4 160 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 KLF13Q9Y2Y9 288 aaPredicted RBP10.42□□□□□ -0.74
NUP54-202ENST00000502850 CHD8Q9HCK8 2581 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 SDK2Q58EX2 2172 aa10.42□□□□□ -0.74
NUP54-202ENST00000502850 MED12Q93074 2177 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 PINLYPA6NC86 204 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 B8ZZF3 427 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 EEF1E1-BLOC1S5C9J1V9 151 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 PRSS44E7EML9 344 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
NUP54-202ENST00000502850 CTSDP07339 412 aaPredicted RBP10.41□□□□□ -0.74
NUP54-202ENST00000502850 PGAM2P15259 253 aa10.41□□□□□ -0.74
NUP54-202ENST00000502850 ITGA3P26006 1051 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms