RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ELOVL3Q9HB03 270 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 CDH20Q9HBT6 801 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 PAK1IP1Q9NWT1 392 aaPredicted RBP4.27□□□□□ -1.73
FXN-205ENST00000498653 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 SLCO1C1Q9NYB5 712 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 ZNF224Q9NZL3 707 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 GNG8Q9UK08 70 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 COPS3Q9UNS2 423 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 ERGIC3Q9Y282 383 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 KLHDC2Q9Y2U9 406 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 CAB39Q9Y376 341 aaPredicted RBP4.27□□□□□ -1.73
FXN-205ENST00000498653 SLC25A15Q9Y619 301 aa4.27□□□□□ -1.73
FXN-205ENST00000498653 ZNF816-ZNF321PA0A0X1KG74 233 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 TMEM129A0AVI4 362 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 F5H5K5 113 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 M0R1B8 84 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 PSMD9O00233 223 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SYNGR3O43761 229 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SULT1C4O75897 302 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 TSPAN9O75954 239 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 APOC1P02654 83 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MT-ND5P03915 603 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SERPINA5P05154 406 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MELTFP08582 738 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 RPSAP08865 295 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 HTR1AP08908 422 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 LIMS3P0CW19 117 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 LIMS4P0CW20 117 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 PTAFRP25105 342 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 STOMP27105 288 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 HSD11B1P28845 292 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 C21orf33P30042 268 aaPredicted RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 DCTDP32321 178 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 OPRL1P41146 370 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MAP2K4P45985 399 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 PRKXP51817 358 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 GBX2P52951 348 aaPredicted RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 TPTEP56180 551 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 OR12D2P58182 307 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 GALK2Q01415 458 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 ROM1Q03395 351 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MRPL28Q13084 256 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 IRF3Q14653 427 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 TBC1D28Q2M2D7 210 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 ZNF829Q3KNS6 432 aaPredicted RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 C3orf36Q3SXR2 165 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 CDONQ4KMG0 1287 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 TP53I3Q53FA7 332 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 ARL9Q6T311 187 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 LRRN1Q6UXK5 716 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 Q6YL49 198 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SSX6Q7RTT6 188 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SPARTQ8N0X7 666 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SYS1Q8N2H4 156 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 ZNF283Q8N7M2 679 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 NANOGP1Q8N7R0 232 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 CPEB3Q8NE35 698 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 SLC30A7Q8NEW0 376 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 IL17RDQ8NFM7 739 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 OR10S1Q8NGN2 331 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 HAVCR2Q8TDQ0 301 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SPRYD4Q8WW59 207 aaPredicted RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 C4orf36Q96KX1 117 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 ZNF75AQ96N20 296 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SIGLEC11Q96RL6 698 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 DCLRE1CQ96SD1 692 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 AMELYQ99218 206 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 KCNS3Q9BQ31 491 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MND1Q9BWT6 205 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 SP140LQ9H930 580 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 NOX3Q9HBY0 568 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 VCX3AQ9NNX9 186 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 PNRC2Q9NPJ4 139 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 CRNNQ9UBG3 495 aaPredicted RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 EIF3KQ9UBQ5 218 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 CLEC2DQ9UHP7 191 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 MRM2Q9UI43 246 aaKnown RBP4.26□□□□□ -1.73
FXN-205ENST00000498653 LRP12Q9Y561 859 aa4.26□□□□□ -1.73
FXN-205ENST00000498653 LOC100509620A0A075B734 347 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 IGHV1-18A0A0C4DH31 117 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 TMEM269A0A1B0GVZ9 245 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 C5orf49A4QMS7 147 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 C9orf118A6NHY6 69 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 ACOD1A6NK06 481 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 PRR32B1ATL7 298 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 ATP6V1G2-DDX39BF2Z307 99 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 LOC110117498-PIK3R3F6TDL0 507 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 M0R135 149 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 MAGEB4O15481 346 aaPredicted RBP4.25□□□□□ -1.73
FXN-205ENST00000498653 RPP14O95059 124 aaKnown RBP4.25□□□□□ -1.73
FXN-205ENST00000498653 DUS4LO95620 317 aaKnown RBP4.25□□□□□ -1.73
FXN-205ENST00000498653 IGKV3-15P01624 115 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 IGLV1-44P01699 117 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 IGHV2-5P01817 119 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 CRYAAP02489 173 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 LCATP04180 440 aa4.25□□□□□ -1.73
FXN-205ENST00000498653 ANXA2P07355 339 aaKnown RBP4.25□□□□□ -1.73
FXN-205ENST00000498653 CELA3BP08861 270 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms